Gene M446_0595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_0595 
Symbol 
ID6135283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp699310 
End bp700464 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content67% 
IMG OID641640915 
Producturea ABC transporter, permease protein UrtC 
Protein accessionYP_001767590 
Protein GI170738935 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID[TIGR03408] urea ABC transporter, permease protein UrtC 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0637205 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCCC CGACCCTCAA CGACAACGCC TTCATGAAGC CGATGGAGTG GGCGAGCCTC 
GCCGTCCTCG CCGCCCTGAT CCTGGTGGTG CTGCCGCTCG CCCTCGACAT CTTCCGGCTC
AACCTCGTCG GCAAGTACCT CACCTACGCC TTCGTCGCGC TCGGCCTCGT CATCTGCTGG
GGCTATTGCG GCATCCTGTC CCTCGGCCAG GGGGTGTTCT TCGGGCTCGG CGGCTACTGC
ATGGCCATGT ACCTGAAGCT CGAAGCCTCC TCGGTCGAGA ACACCAAGAT CCAGTCGACG
CCGGGCATCC CCGACTTCAT GGACTGGAAC CAGGTCACGG CCCTGCCCTG GTTCTGGAAG
CCGTTCCACT CCCTGCCGCT CACGCTGCTC GCCGTGGTGG CGGTGCCGAC CCTGTTCGCC
CTCGTCATCA GCGCGGCGAT GTTCAAGCGG CGGGTCGGCG GCACCTACTT CGCGATCATC
ACCCAGGCGA TCGCCGCGAT CCTCACCATC CTGATCGTCG GCCAGCAGGG CTACACGGGC
GGCATCAACG GCATCACCGA CCTGCGCACG CTCCACGGCT GGGACATCCG CACCGACCAC
GCCAAAACCG TGCTCTACTT CGTCAACGGC GGGCTCCTGA TCGCCTGCAT CCTGGCCGCG
CAATACGTCA AGCGCTCGAA GCTCGGCCGC ATCCTGGTCG CCATGCGCGA CAAGGAGGAC
CGGGTCCGCT TCTCGGGCTA CTCGGTGGCG AGCTTCAAGA TCTTCGCATT CTGCCTCGCG
GCGGCCTTCG CGGCGATCGG CGGGGCGATG TTCACCCTGC AGGTCGGCTT CATGTCGCCG
TCCTTCGTCG GCATCGTGCC GTCGATCGAG ATGGTGATCT ACACCGCGGT CGGCGGGCGC
CTGTCGCTGT TCGGCGCGGT CTACGGCACG CTGCTCGTCA ACTGGGCCAA GACCAGCTTC
TCGGAGAGCT TTCCCGAACT CTGGCTGTTC GGCCTCGGCG CGCTGTTCAT CGGGGTGGTG
CTGGCCTTCC CGAACGGGCT CGCCGGGATC TGGCGCCAGT TCGTGGCGCC GCGCCTCTCC
GCCACACCCG ATCCCGCCAA ACCCGGCGCC CCCGTCCTCC CGGCCGCGCT GCCGCACGGC
GCCCCGGCCG AATAG
 
Protein sequence
MTSPTLNDNA FMKPMEWASL AVLAALILVV LPLALDIFRL NLVGKYLTYA FVALGLVICW 
GYCGILSLGQ GVFFGLGGYC MAMYLKLEAS SVENTKIQST PGIPDFMDWN QVTALPWFWK
PFHSLPLTLL AVVAVPTLFA LVISAAMFKR RVGGTYFAII TQAIAAILTI LIVGQQGYTG
GINGITDLRT LHGWDIRTDH AKTVLYFVNG GLLIACILAA QYVKRSKLGR ILVAMRDKED
RVRFSGYSVA SFKIFAFCLA AAFAAIGGAM FTLQVGFMSP SFVGIVPSIE MVIYTAVGGR
LSLFGAVYGT LLVNWAKTSF SESFPELWLF GLGALFIGVV LAFPNGLAGI WRQFVAPRLS
ATPDPAKPGA PVLPAALPHG APAE