Gene M446_0549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_0549 
Symbol 
ID6130638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp653671 
End bp654912 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content72% 
IMG OID641640870 
Productextracellular ligand-binding receptor 
Protein accessionYP_001767545 
Protein GI170738890 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGGGT TTCTGGCGGG CGGGGCGGCG CCGACGCGCC GCGCGGTGAT CGGCGGCGGG 
CTCGCCCTCG GGGCGCTGGC CGGGCTCGGG CGGCCGGCCC GCGCCGCCGA GCCGATCCGC
ATCGGCTTCC CGGTCCCGAT CACCGGCCCG TTCGGGGCGG AGGCGAAGGA CCAGGTCCGC
AGCGCCGAAC TCGCCGTGCG CCAGTTCAAC GAGGCCGGCG GCCTCGGCGG CCGCATGGCC
GAGCTCCTGG TCCGCGACGA CAAGCTCAAC CCCGGCGAGG CCGCCACCCG CACCCTCGAA
CTGATCGAGA AGGACAGGGC CCACTTCATC GTCGGCGCCC TGTCGAGCGC GGTGCAGCTC
TCGGTCAACG AGATCACCCG CTCGCGCAAG GTGCTCTACG TCTCGATCAG CCAGTCGGAC
ACGATCAACG AGGCCAAGGA TTTCGGCCGC ACCACCTTCC ACGAGGCGCT CAACCCGCAC
ATGACGACCG CCGCGGTCGC CAAGCACGCC TTCCGCAAGG GCAGCCGGAT CGCCTACCTC
GCCGCCGACT ACGCCTACGG CCACGAGATG CTGCGCGGCT TCAAGCGCGC CGCGGCCGCG
ATCGGCGCCG AGACCGCGGG CGAGATCCTG CATCCCTTCG GGGCGCCCGA CTACTCGACC
TTCATGCCGC GGCTGCGGAC CATGAGGCCC GACATCCTCT GCATCTGCAA TTTCGGCCGC
GACCAGGCGA ACGCCATCAA GCAGGCGAAC GATTTCGGCA TGAAGCGGGC CTCGCGCCTC
GTCGTGCCGG TGCTCCTGCA CAACCAGCGC CTCGCGGCCG GGCCCGACGC CTTCGAGGGC
GTCGTCGGCG CCGCGAACTA CTTCTGGCGC CTGGAGGAGA CGGTGCCGAG CGCCAGGGCC
TTCAACGACG CCTTCCGGGC CGCGCATGGC GGCGCCGTCC CGACCGATTA CGGCGCCTAC
GCCTACACGG CCGTGCGCGC GCTGCTGATG GCGGTGACGA AGGCCGGCGG CACCGACACC
GAGGCGGTCG TGACCGCCCT CGAAGGGCTC ACCTACGACG TCGCCAAGGG GCCGGAGCAT
TACCGCGCCT GCGACCACCA GGCGGTGCAG TCGGTCCTGG TCCTCGAATC CAAGAAGAAG
TCCGAGATGG CGGGCGAGGC CGACCTCTTC ACCATCCTGG CGATCGAGCC GGGGTCCGAG
GCCGCCCTGC GCAGCTGCGA GGAACTCGGC CACAGGGCCT GA
 
Protein sequence
MGGFLAGGAA PTRRAVIGGG LALGALAGLG RPARAAEPIR IGFPVPITGP FGAEAKDQVR 
SAELAVRQFN EAGGLGGRMA ELLVRDDKLN PGEAATRTLE LIEKDRAHFI VGALSSAVQL
SVNEITRSRK VLYVSISQSD TINEAKDFGR TTFHEALNPH MTTAAVAKHA FRKGSRIAYL
AADYAYGHEM LRGFKRAAAA IGAETAGEIL HPFGAPDYST FMPRLRTMRP DILCICNFGR
DQANAIKQAN DFGMKRASRL VVPVLLHNQR LAAGPDAFEG VVGAANYFWR LEETVPSARA
FNDAFRAAHG GAVPTDYGAY AYTAVRALLM AVTKAGGTDT EAVVTALEGL TYDVAKGPEH
YRACDHQAVQ SVLVLESKKK SEMAGEADLF TILAIEPGSE AALRSCEELG HRA