Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_0540 |
Symbol | |
ID | 6135238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | + |
Start bp | 641718 |
End bp | 644888 |
Gene Length | 3171 bp |
Protein Length | 1056 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641640861 |
Product | peptidase C14 caspase catalytic subunit p20 |
Protein accession | YP_001767536 |
Protein GI | 170738881 |
COG category | [R] General function prediction only |
COG ID | [COG4249] Uncharacterized protein containing caspase domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0423513 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0609988 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAAAG CAACTGCCTT GGTGCTTGCC TTAGGGCTCC TCGGCCAGGC GAGTTCGGGG GCCCGGGCGT TGGACGCGAT TGGCCACAAT GCTCGCGGCT TCGAACTGCA AAATCGAGGC GAGCATGAGA AAGCAATCGC CGAATTCAAT CTTGCCCTGC GGCTCAATCC CAAACTGGTG TCAGCCTACA TCAATCGCGG TTTCGCCTTT CGAAACAAGG GTGACTACGA TCGCGCGATC GCCGATTATG ATCATGCCTT GCAGATCGAT CCAAATTCAG TAGTCGCCTT TAACAATCGC GGTGATGCAT TTTATCATAA GGGAGAATAC GATCGAGCGA TTGCAGACTA TAATCGCTCA ATCAAGCTGA GCTCCGACAA GGCAGCCGTA TATAATAATC GTGGGCTCGC ATTCTTCAGC AAGGAGGAAT ACGATCGGGC CATCGCGGAT TACAATCAAG CTTTGCGGCT CGACCCTAAA TACCTGAGCG CCGCGCTCAA CCGCGGGGAT GCGTTTCGAA GCAAGGGCGA GTATGATCGT GCGATCGCGG ACTATAATCA AGTCCTGCAG ATCGATCCCA GGTCCGTGGT ATCTTACAAC AATCGCGGGC TCGCGTTCCA GGGCAAAGGC GAATACGACC GAGCTGTTGC CGATTACAAC CAAGCGCTCA CTCTCGATCC GGGCTACACG ATCGCTCTCA TCAACCGCGG AGATGTGTTC AGGATCAAAG GTCAGTACGA TTCTGCGATT GAGAATTATA ACCAAGCCTT GCAGTTAAAT CCAAAATCAA AGATTGCCTA CAACAATCGA GGCTTCGTGT TCTACAACAA AGGAGAGTAC GACCGCGCGA TTGCGGACTA TAATTCAGCG CTGCAGATTG ACCCCAGATA CGTGGTCGCG CTCGTCAATC GTGGCGATGC CTTTGTGAGC AAGGGTGACT ACGATCGGGC GATCGGAGAC TATGGCCATG CTCTCCAGAT CAATCCGAAT TACGCCTTTG CCTATAATGG GCGTGGAGTC GCCCTTCAGA ACAAAGGTGA GTATGACCGC GCCATCATGG ATTACGATCA AGCCTTGCGA CTCGATCCGA AATACGTTTT CGCCTTTGCG AACCGCGGGG ATGCCTTCCG GAGCAAAGGC GAGCACGACG TCGCGATCGC CGATTACAAT CAGGCCCTTC GCTTAAGCCC AAACTACGCC AAAGCCTATA ATGGTCGAGG TCTGTCCTTC CAGAATAAGG CTCAATACAA CCGGGCAATC GAGGATTATG AACAAGTCAT TCGTCTCGAC CCAAGGTTCG TGGCCGCCTA CAACAATCGC GGCTTTGCCC TCGTCAGCAA AGGTGAGCCG ACCCTTGCGA TCGCGGATTA CGACAAAGCC TTGTTGCTCG ATCCGAAATC TGCGACGGTT TACGCGAACC GTGGGCGTGC CTTTCAGGAC AAGGGTGAGT ACGATCGCGC AATCGCGGAC TATGATCAGG CCTTGCGCCT CAATCCGAAG GACGCCATCG CCTTGAACAA TCGCGCGGAT ATTTTGCGCC TTCGGCACGA GCATGATCGG GCAATTGCAA GCTATGATCA AGCCCTGCAG CTCAACCCGA AATACGTGGG TGCTTATAAT AGCCGTGGGT TAGCGTTTCA GGACAAAGGT GAATACGACC GAGCTATTGC AAATTACGAT CAAGCCTTAC AGCTGAATCC TAGGTATATT ACTGCTTACA TCAATCGCGG AGACGCATAC CGCCGCAAAG GCGAGCACGC GCGAGCGATC TCCGACTATA ATCAAGCGCT TCAGATCGAC CAAAATTCTG TGATTGCCTA CAATAACCGC GGATTATGTT TTCATGAACA AGGAGAGTAC GACCGGGCAA TCATCGACTA CGACCGCGCC CTGCAAATCG ATCCGATGTA TTCAACCGGG TTCATCAATC GTGGATTCGC CTTTCATAAG AAGGGAGAAT ATGATCGAGC AATCGCCGAT TATGATCGCG CCTTGCAAAT TGATCCCAGG TCCGCAACAG CTTACAACAA TCGCGGCTTC ACTTTCCAAA ACAGAGGTGA GTACGATCTG GCAATCGTCG ACTACGATAA GGCCATTCTG ATTAAGCCCG ACTTGGCGAA TTCTTATTAT CACCGCGGGA CAGTGCTGCG GCTCAAAGGA GACCTTGAAC GCAGTGTCGC GGATTTAACT GAAGCCATAC GCCTCAACCC CAGATATGCT GAAGCGTACC AAGATCGGGG CCTCACCTTC CACGCGAAAG GCGAGGCGGA CCGGGCTCTC GCGGATTTCG CCGAGGCTGC CCGGCTGAAA CCCGAGTTCG AGAATGATCC GGCCTTCCTC GCGGCCCGCC GCGTGGCGCA GGAGGGTCGC GCGGGTCAGG CTTCGGCTGC CTCGGTTGTC GCGGCCGTCC ATGCCCCTCC GGTCGTGGCC CCGCCCCCGG TTTCCGCCGC CGCACCGGTG TCGGAGACGC GCGTGGCCCT GGTGATCGGC AACGGTGCGT ATGCCTCCGT GGCCTCTCTC GAGAACCCGA CGCGAGATGC CAGGGCCATC GCGCGCTCGT TGCGTGAAGC TGGCTTCAAG ATCGTCCATC TGGAGAATGA CCTCCGCTAT GATGACCTGC GAAGAGCTCT GAACAATTTC TCCGCCGAAG CTGATCAGGC CGATTGGGCC GTTGTTTACT ACGCGGGTCA CGGCATAGAA GTCGGCGGCC TGAATTACAT CGTTCCGATC GATGCGCGGC TGAAAACGGA CCGAGCCGTC CAATTTGAGG CGGTTCCGCT TGATCAGGTT CTGAGCAGCA TCGAAGGCGC GCGAAAGCTT CGCCTCGTGA TCTTGGATGC GTGTCGGGAT AACCCGTTCC TGCAGCAGAT GACGCGCACG GTCGCTTGGC GTTCGGTGGG ACGAGGCTTG GCGAAGGTCG AGCCGGAGAC GAGCGGCACG CTGGTGGCGT TCGCAGCCAA GCATGGCCAG GTTGCCCTGG ATGCGCAGGA TGGCCGTGAA AATAGTCCCT TCGCGACCGC GCTGATCAGG AACATCGCGC GACCTGGCAT AGAAATCCGC AAGATGTTCG GGATCGTGCA CGATGACGTC ATGTCGGGCA CGGGGCGCAA GCAGGAACCT TTCGTGTATG GCGCGCTCGG GGGTGAGGAT TATTTCTTCA ACGTGCGCTA G
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Protein sequence | MRKATALVLA LGLLGQASSG ARALDAIGHN ARGFELQNRG EHEKAIAEFN LALRLNPKLV SAYINRGFAF RNKGDYDRAI ADYDHALQID PNSVVAFNNR GDAFYHKGEY DRAIADYNRS IKLSSDKAAV YNNRGLAFFS KEEYDRAIAD YNQALRLDPK YLSAALNRGD AFRSKGEYDR AIADYNQVLQ IDPRSVVSYN NRGLAFQGKG EYDRAVADYN QALTLDPGYT IALINRGDVF RIKGQYDSAI ENYNQALQLN PKSKIAYNNR GFVFYNKGEY DRAIADYNSA LQIDPRYVVA LVNRGDAFVS KGDYDRAIGD YGHALQINPN YAFAYNGRGV ALQNKGEYDR AIMDYDQALR LDPKYVFAFA NRGDAFRSKG EHDVAIADYN QALRLSPNYA KAYNGRGLSF QNKAQYNRAI EDYEQVIRLD PRFVAAYNNR GFALVSKGEP TLAIADYDKA LLLDPKSATV YANRGRAFQD KGEYDRAIAD YDQALRLNPK DAIALNNRAD ILRLRHEHDR AIASYDQALQ LNPKYVGAYN SRGLAFQDKG EYDRAIANYD QALQLNPRYI TAYINRGDAY RRKGEHARAI SDYNQALQID QNSVIAYNNR GLCFHEQGEY DRAIIDYDRA LQIDPMYSTG FINRGFAFHK KGEYDRAIAD YDRALQIDPR SATAYNNRGF TFQNRGEYDL AIVDYDKAIL IKPDLANSYY HRGTVLRLKG DLERSVADLT EAIRLNPRYA EAYQDRGLTF HAKGEADRAL ADFAEAARLK PEFENDPAFL AARRVAQEGR AGQASAASVV AAVHAPPVVA PPPVSAAAPV SETRVALVIG NGAYASVASL ENPTRDARAI ARSLREAGFK IVHLENDLRY DDLRRALNNF SAEADQADWA VVYYAGHGIE VGGLNYIVPI DARLKTDRAV QFEAVPLDQV LSSIEGARKL RLVILDACRD NPFLQQMTRT VAWRSVGRGL AKVEPETSGT LVAFAAKHGQ VALDAQDGRE NSPFATALIR NIARPGIEIR KMFGIVHDDV MSGTGRKQEP FVYGALGGED YFFNVR
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