Gene M446_0528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_0528 
Symbol 
ID6134130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp627012 
End bp628415 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content71% 
IMG OID641640849 
Productmajor facilitator transporter 
Protein accessionYP_001767524 
Protein GI170738869 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0826405 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00770286 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGACCAG ACGCCACGAC TGCCCCCGTC AACGCGGGAG GCCGGCTCGA CCGGCTGCCG 
ATCGGCCCGT TCCACTACCG GATCATGTGG CTGATCGGGA TCGGGATGTT CTTCGACGGC
TTCGACATCT ACATCGCCGG GACCGTGCTC GGCGCGACGC TGAAGAGCGG GTTCTCGACC
CTGCCGGAGA ACGCCCTGTT CGTCTCGTCG ACCTTCGTCG GGATGATGGC CGGCTCGTTC
CTGACCGGCT TCCTGGGCGA CCGCTACGGC CGGCGCTTCA CCTACCAGGC GAACCTGCTG
ATCTTCGGCC TCGCCGCCAT CGCGGCGGCC TTCGCGCCCT CCATGACCGT GCTGATCGTC
CTGCGCTTCA TCATGGGGGT GGGGCTCGGG GCCGAGAACG TGGTCGGCTA CTCGACCATG
ACGGAGTTCG TGCCGGCCCG CTCGCGGGGG CGCTGGCTCG GGCTGATGGC GGTCTTCGTG
GTGACCGGCC TGCCGGTCGC CTCGCTCGCC GGCTACGTGG TGATCCCGCT GCTTGGCTGG
CGGGCGATGT TCGTCCTCGG CGGCCTCGGC GCCCTGGGCG TCTGGTACCT CCGCAAGCGC
CTGCCGGAAT CGCCGCGCTG GCTCGAGGCC GTGGGCCGGA CCGAGGAGGC CGACGCGCTC
CTGCGCGAGA TCGAGCGGGA GGCCGCGCGC GGCGGCGCGC TGCCGCCGCC GGCGCCGCTC
GGCCCGCCCG CGCCCAAGGC CGCCTTCGCG ACCCTGTTCC GGCCGCCGCT CCTCGGGCGG
GTGATCGTCG GCTGCCTGTG CCTGATCGTG ATCAACACCC TGCTGTACGG CTTCGTGACC
TGGCTGCCGA CCTTCTTCAT CAAGCAGGGC CTGAGCGTGG CGACCTCGTT CGGCTACTCG
CTGCTGATGG GGCTCGGCGC CCCGATCGGC AGCGCGATCG GCGCCCTCAC GGCCGACCGC
TGGGGCCGCA AGCCCACCAT CGCGGGCGCC TCGGCGGCGG CGATCCTGTT CGGCCTCCTC
TACCCGCTCA CCACCGACCC CGTGCTGCTG CCGCTCGTCG GCTTCGGCCT CACGGTGCCG
ATCTACGTCC TCGTCGCGCT CCTGTTCGGG ATCTACATCC CCGAACTCTT CCCCACGGAG
GTGCGCCTGC GCGCCTCGGG CCTGTGCAAC ACCTTCGGCC GCGGCGCGAC CATCGTGACG
CCCTTCATCG TGGTCTCGCT GTTCCAGACC TACGGGATCG GCGGCGTGAT GGCGCTGATG
ATCGGGCTCC TCGCCGTTCA GATCGTCACG GTGCTGGCCC TCGGCGTCGA GCCGCGCCAG
CAGAGCCTGG AGGAGATGAA GCCGCGCGAC CTCGGCGGGG TGCAGGAGGA GCCGGTCCGC
ACGGTGCAGC GCGGCCTGGC CTGA
 
Protein sequence
MRPDATTAPV NAGGRLDRLP IGPFHYRIMW LIGIGMFFDG FDIYIAGTVL GATLKSGFST 
LPENALFVSS TFVGMMAGSF LTGFLGDRYG RRFTYQANLL IFGLAAIAAA FAPSMTVLIV
LRFIMGVGLG AENVVGYSTM TEFVPARSRG RWLGLMAVFV VTGLPVASLA GYVVIPLLGW
RAMFVLGGLG ALGVWYLRKR LPESPRWLEA VGRTEEADAL LREIEREAAR GGALPPPAPL
GPPAPKAAFA TLFRPPLLGR VIVGCLCLIV INTLLYGFVT WLPTFFIKQG LSVATSFGYS
LLMGLGAPIG SAIGALTADR WGRKPTIAGA SAAAILFGLL YPLTTDPVLL PLVGFGLTVP
IYVLVALLFG IYIPELFPTE VRLRASGLCN TFGRGATIVT PFIVVSLFQT YGIGGVMALM
IGLLAVQIVT VLALGVEPRQ QSLEEMKPRD LGGVQEEPVR TVQRGLA