| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_0512 |
|---|
| Symbol | |
|---|
| ID | 6129211 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 610156 |
|---|
| End bp | 611187 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641640834 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001767509 |
|---|
| Protein GI | 170738854 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.594629 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00245431 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGATC GGACCATCCA GAGCGGCGGG AGCGACGGCG CGCGGGTGCT CAGCCACAAG
TTCGAGCCGC CCGCCGATCC GCGCGACCTG GCGCGCGCGT GGTGCGAGCA CATCGCACCC
GCCTTCGAGG TCGGCCTGCG GCCCGAGGCC GACCTGTCGG CGCCGATCGC GATGCAGACC
TACCACCTCG GGGACCTGAT CGTCGGGGAC GTGATCGCGC CCGCCCACGT CCTGGAGCGC
GGATCGCGGA TGATCGAGCG GCAGGGGATC GACCACATCC TGATCCAATT CTACCGGCGC
GGGCAGAGCA CCGTCGAGCG GCGCGACGGG AGCGAGCGGG TCACGGAGGG GCAATGCGTG
GTCTTCGATC TCGCCCAGCC CGTCCGCATC GTCGCCGAGC CGGTCGATGC GACGAACCTC
GTCGTGCCCC GCGCCCGCCT GGAGGACCAG GGATGCCAAG TGGGCGGCCT CCACGGCCGC
GCCTTCGACT ACGACGGCGA CCCGTTCGGA CGGCTGTTCC ACGAGTTCCT CGCCAACCTC
GTCGCCTGCG GCGACCTGCT CCATCCGCGC GAGGCCGCCG CCGGCGCGCG CGCCCTGGTG
CAGCTCTGCG ACACCTTCCT GCGCGGGCGC GCGGGGAACG GCCCCCCGCA GAACCTCGAC
GCGCGCATCC GGGTCCGGCG CTTCATCGAG CGTCAGCTTC ACGATTTCGA CCTGGGCCCG
GCCATGATCG CGGCGCAGCT GGGCCTGTCG CGCTCCACCC TGTACCGCCT CTTCGGTGAG
ACGGGCGGCG TGCTGGCCTA TATCCGGGAC CGCCGCCTGA TGCGCGCGAT GCGCCTCCTG
GTCCGGTCCG ACGCGGCGCA GCCGATGCGG ATCTCGCAAC TCGCCTACGC GGTCGGCTTC
GCCGACGAGA AGACGTTCCG GCGCGCCTTC CGGCGCCGGT TCGGGTTCCT GCCGAGCGAG
GCGATGGCCT ACCAGCTCGG CCCCGACGAT GCCGGGATGC CGGTCCTGCG CCGCTGGTTC
GACAACCTGT AG
|
|---|
| Protein sequence | MADRTIQSGG SDGARVLSHK FEPPADPRDL ARAWCEHIAP AFEVGLRPEA DLSAPIAMQT
YHLGDLIVGD VIAPAHVLER GSRMIERQGI DHILIQFYRR GQSTVERRDG SERVTEGQCV
VFDLAQPVRI VAEPVDATNL VVPRARLEDQ GCQVGGLHGR AFDYDGDPFG RLFHEFLANL
VACGDLLHPR EAAAGARALV QLCDTFLRGR AGNGPPQNLD ARIRVRRFIE RQLHDFDLGP
AMIAAQLGLS RSTLYRLFGE TGGVLAYIRD RRLMRAMRLL VRSDAAQPMR ISQLAYAVGF
ADEKTFRRAF RRRFGFLPSE AMAYQLGPDD AGMPVLRRWF DNL
|
|---|
| |