Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_0510 |
Symbol | |
ID | 6129170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 605318 |
End bp | 607714 |
Gene Length | 2397 bp |
Protein Length | 798 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641640832 |
Product | TonB-dependent receptor |
Protein accession | YP_001767507 |
Protein GI | 170738852 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.426482 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00139676 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCGGTGA AAATTAGAAC GTTCTATAAA GGGCTGATCG CGTGTCTGGC CGCGGCCGCC CTCCCGCACG CCGCCCTGGC ACAGGGGGCA ACCGACCTCG GCACGGTCTC GGTCGAGGCG GCGGCGGCGC GCGGCGAGGG GGCGGGCGAC CGCGGGGCGC CGCTCCTGGC CGAGCAGAAC GGTACTGCGG CGGCCACCAC CCTGCGCCGG GAGGACATCG CGCGGCAGCC GGGCACCGCG AATCTGGCGC AGCGGATCGG CGGAATCGCC GGCGTGAACT CCTATTCGCG CGATCCCTCG GGTCTGTTCG GCGGGGGATA CTCGATCCGC GGCTTCGACA GCACGCAGAT CGGCCTCTCC CTCAACGGCG TGCCGCTCAA CGATCCGGGC ACTTTCTCGG TCCTGCCCCA GATCTACACG GACAGCGAGA ATCTCTGCGC CGTCGACGTC ACGCAGGGGA CGAGCGCCGG CACGGTCGCG CAGCACGGCG CCATCGGCGG CCAGGTCAGC ATGGAGCAGT GCCGACCGGC CGACGCGCCG GCGGTCACCT TCTCGCAATC GTTCGGCTCC TACTTCCTCA ACAAGACGTT CCTGCGCGCC AATACCGGCC CCCTCTTCGA CGAGGTGCTG AAGGGCTACG TGTCCTACTC GCACGCGCGG TCGGACTACT TCGCAGGCCC CGGAGAGGCG GAGCGGCATC ACGTCGACAG CCGGTTCGAC GTCAAGCTCG ACAATGGCGG CAGCATCAGC TTCACGTCGT TCTACAACGA GTTCGCCAAT ACCTTCGTCC GGACCGTGAC GAAGGATCAG TACCAAGCCT TCGGCTATCG CAATGGCTGG CTGCGGACGC CGCCGACGAT CCTCACCGGT CCGGGCGCGG TCTTCTCGGC GATCGGTCTG GCGGTCACCC CCACGCCGGC CAATACCGGC TATTCCGGCT ATTCCTGGGA GCCCGGCCGC CACGCCTACG CGTCGATCGA CGGGCGCTTC CCGCTCTCGG ACGGCGTCGA GCTGCGCCTG ACGCCCTACT TCCTGCACCA GGAATCCGGG AGCACGAGCG AGATCGTGCT CAAGGAGGCC GGCTACGCCG GCAAGCTCCT GTCGAGCCCG ATCGGCGCCT TCTCGGCCTA CGGCACCCGG GGCACCAACG CCCTGCTCGG CCAGATGAGC CAGAGCGACT TCGACCGGGT CGGCAACGTC GTCAGCCTCA CCGGGCGGCT CGACAACCAC ACCGTCACGG GCAGCCTCTG GACCGAGTAC ACCTATCAGC ATCAAATGAA TCCGTTCCAG CAGATCGATC AGACGAATAA CACTTTGCCT GATATCTGGT TCAAGTCGAA CCTTCTGCGC GGCTTCGACG GAAATATCGT CACGAACCGC AACTGGAAGA CGGATTATTA CAATACGACG GTGGCGATTT CCGACAGCAT ATCGCTGCTC GATGACGCCA TGCACGTCGA TCTCTCGCTG CGGCAGAAGT TCTACTCGCG CAGCTTCCAT AATCTTCCGT CCGGCACGAG TACCAGAACG GATTCGTACC TGGATTACAC GGTGAACAGA AGCTACGCCT TCCTGCTGCC GGCGGTGGGG ATGCGCTACG ATCTCGACGC GGCGAACCAG GTCTTCGCGA ACGCGTCGAT GAATGCCAGG GTCCCGCCCA ATTTCGCGGA TGGCCGCTTG GTCAACGGCG CCACCAACCT GATCCAGGTG CCGACCATCA AGGCGGAGCG CGCCCTGAGC TTCGATCTGG GCTACCGCCT GAAGGGCGAC TTCCTGGACG TCAACGCGAC CGGCTTCCTG ATCAAGTACA GCGACCGGAT CGCCCAGACC GCCAACGGCG ACGGCTCCCT CTCGAGCAAG TACACCAACA TCGGCAGCAC CACCGCGGTC GGCGCCGAGG TCGAGGTGGC GACCAAGCCG TACGAGGGCT GGAGCGTGCT GCTCTCCCAG GCCATCAACC ACGACACGAT CGACGGCAAC ATCGTTCCCG ACCCGAAATC GCCGGCGCTG CGCACCAAGG GCAAGTTCTA CTTCAACTCC CCCTTGTCCC TGACGGCGTC GACCGTGATG TACGAGAACG GGCCCTTCTT CGCCTTCGCC CGCGCCAAGT ACACCAGCGA GGTCTACGCC ACGCTCACCA ACGACATCTC CCTGCCGGGC TACGCCACGG TCGATCTCGG TCTCGGCTAC AAGCTGAAGG GCACATCCCT GGTCGAGGCG ATCCCGGGCG CGCAGGACGG GCTATTCAAG CTGAACGTCA CGAATCTCTT CAACAAGAAG TACATCTACA TCAACCCTGG CAACACGACC GGCTTCGCGC TCAGCGCGGC GAACGCGCCG AGCTTCTATC TCGGCTCGCC CTTCGCGGTC ACCGCCAGCC TGACCTTGGA TTTCTGA
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Protein sequence | MSVKIRTFYK GLIACLAAAA LPHAALAQGA TDLGTVSVEA AAARGEGAGD RGAPLLAEQN GTAAATTLRR EDIARQPGTA NLAQRIGGIA GVNSYSRDPS GLFGGGYSIR GFDSTQIGLS LNGVPLNDPG TFSVLPQIYT DSENLCAVDV TQGTSAGTVA QHGAIGGQVS MEQCRPADAP AVTFSQSFGS YFLNKTFLRA NTGPLFDEVL KGYVSYSHAR SDYFAGPGEA ERHHVDSRFD VKLDNGGSIS FTSFYNEFAN TFVRTVTKDQ YQAFGYRNGW LRTPPTILTG PGAVFSAIGL AVTPTPANTG YSGYSWEPGR HAYASIDGRF PLSDGVELRL TPYFLHQESG STSEIVLKEA GYAGKLLSSP IGAFSAYGTR GTNALLGQMS QSDFDRVGNV VSLTGRLDNH TVTGSLWTEY TYQHQMNPFQ QIDQTNNTLP DIWFKSNLLR GFDGNIVTNR NWKTDYYNTT VAISDSISLL DDAMHVDLSL RQKFYSRSFH NLPSGTSTRT DSYLDYTVNR SYAFLLPAVG MRYDLDAANQ VFANASMNAR VPPNFADGRL VNGATNLIQV PTIKAERALS FDLGYRLKGD FLDVNATGFL IKYSDRIAQT ANGDGSLSSK YTNIGSTTAV GAEVEVATKP YEGWSVLLSQ AINHDTIDGN IVPDPKSPAL RTKGKFYFNS PLSLTASTVM YENGPFFAFA RAKYTSEVYA TLTNDISLPG YATVDLGLGY KLKGTSLVEA IPGAQDGLFK LNVTNLFNKK YIYINPGNTT GFALSAANAP SFYLGSPFAV TASLTLDF
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