Gene M446_0491 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_0491 
Symbol 
ID6133491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp577359 
End bp580481 
Gene Length3123 bp 
Protein Length1040 aa 
Translation table11 
GC content78% 
IMG OID641640813 
Productdouble-strand break repair protein AddB 
Protein accessionYP_001767488 
Protein GI170738833 
COG category[L] Replication, recombination and repair 
COG ID[COG3893] Inactivated superfamily I helicase 
TIGRFAM ID[TIGR02786] double-strand break repair protein AddB, alphaproteobacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00465819 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGCGCGG CCCGGATCTT CACCATCCCG CCCGGCGCGC CGTTCCTGGC GACCCTCGCC 
GACGCGCTCC TCGACGGCAC GCTCGTCGGC CCGGTCGCGC AGGGGCCGCT CGGCCTCGCC
GCCGTCACGC TCTTCCTGCC GACCCGGCGC GCCACCCGGG CGCTCGCCGC GGAACTCGCC
GCGCGCTGCG GGCCGGCGGT GCTGCTGCCG CGGATGACGC CCCTCGGCGA GGCGGACGAG
GCCGAGCTCG ACCTCGCGGC GCTCGCCCCC GGCGAGTGCC CGGAGGCGGT TGCGCACCCG
CCGATCCCTG CCCTGGAGCG GCGCCTGATC CTCGCCCGCC TCGTCCAGGC CTGGGCCGCC
GGCATCGACC GCCGGCTCCT GCCGATGGGC GAGGAGGTGC CCTTCCGGGT GCCGTCCTCG
CCGGCCGACG CGGTCGGCCT CGCGGCCGAT CTCGAGGGGC TGATGGACGC GCTCACCGTC
GAGGGCCTGC CCTGGGACGA GATCGGGCGC GCCGTCGAGG CGGAATACTC GCAGTACTTC
TCGCTTACCC TCGACTTCGT GCGCATCGCC GCCGAGCATT GGCCGGCGAT CCTGGCCGAG
CGGGGCGTCA GCGACCCGGT GGCGCGGGGC CGCGCCCTGG TGCTCGCCGA GGCCGCGCGC
CTGCGCCGCG AGCGCCCGGC CGACCCGATC GTGGTGGCCG GCTCGACCGG CTCGATCCCC
GCCACCGCCG CCCTGATCGG GGCCATCGCG GCGATGCCGC GCGGGGCGGT GGTGCTGCCC
GGCCTCGACC TCGCCCTCGA CGAGGAGGGC TGGGCGGCGA TCGAGACCGG GGAGGCGGTC
GCGCACGGCC ACCCGCAGGC GATCCTGCAC CGGCTCCTGC GCGGCCTCGA CTGCCCCCGC
GCCGCGGTGC GGCCCCTCGG CGCGCCGGGA CCAGCCGCGC GGGCCCGGGC CGAACTCCTG
TCGCAGGCCC TGCGCCCGGC CGAGACCACG GATGCCTGGG CGGATCTGGA TCCCGGGGCG
CGCGAGGCGC TCGCCCGCGC GGGCGGCGCC GGGCTCGCCC TCGTCGAGGC GGCCGACGAG
CGCGAGGAGG CGCTCGCCAT CGCGGTGGCC CTGCGCGAGG CGCTGGAGCG GCCGGATTGC
CGCGCCGCCC TGATCACCCC GGACCGCGGC CTCGCCCGCC GGGTCGCGGC GGAGCTCGGG
CGCTGGGAGA TCGTGGCGGA GGACACGGCC GGGCAGCCGC TGGCGCTGAG CCTCGCCGGG
CGCCTCGCGC GGCTCGCCAC CGACGTCGCC GCCCTCGACG CCAAGCCCGA GCGGGTGCTG
GCGCTCCTCG CCCATCCGAT GGTGCGGCTC GGCCTGGCCC GGCCCGCGCT GGAGCGGGCC
GCCGCCGCCC TGGAGATCGG GGTGCTGCGC GGTCCCGCTC CCGCCAAGGG CTTCGCCGGC
CTCGCCGAGG CGCTCCGGGT CGCGCGCGGC GGCGAGCGCC CGCACGCCCC CCGGCCGGTG
CGGCGGCTGA CCCAGGCCGA TTGGGAGGCG GCGGCCGACC TCGTCGCCCG GCTCGACCGC
GCTTTCCGGG ATTTCGCCCC CCGAGATTTC GCCCCCGACC AGGAGGAGGG CGTCCGCGAC
CTCGTCGCCC TGGCGCAGGC CCATCGCGAG ACCTGCGACC TCCTGCTCGA CGGGCCCGAC
GCGCCGCAGG ACGAGCCCTC GGTCGCGGTG CTCGACGGGC TCTTCGACGA TCTCGCCCTC
GCGCAGGCGG GCATGCTGGA GGGCCGGTTC TCGGATTACC CGGCCTTCTT CACCGCGCTC
GCCCGCGAGC GGGTGGTGAG CGCGCGGGCG GAGCGCCCGC ATCCGCGGCT GCGCATCCTC
GGCCTCCTGG AGGCGCGGCT GCTGCGGGTC GACCGCGTGG TCCTGGGCGG CCTCGACGAG
GGCGTCTGGC CGCCCAAGGC CGAGACGGAC GCCTTCCTGA ACCGGCCGAT GCGCGCGGCT
GTGGGCCTCT CCTCGCCGGA GCGCCGCCTC GGCCAGACCG CCCACGACCT CGTGCAGGCG
CTCGGCTGCC CGGACGCGGT GATCACCCGC GCCCACAAGC GCGAGGGCTC GCCGACCGTG
CCGTCGCGCT TCCTGCAGCG GCTGCGCGCC TTCATGGGGG AGGCGGCGTG GTCCGGCTGC
CTCGCGGCGG GCGGGCGGCT GCGGGCGCTG GCGGCGTCCC TCGACCGGGG CACCGAGCCG
CTGCCGCCCC GCCCGGCGCG CCCGGCCCCG AGGCCGGACC CCGCCCTGTT CCCGCGCGCG
CTCAGCGTCA CCGAGGTCGA GACCCTGGTG CGCGACCCCT ACGGGATCTT CGCGCGGCAC
GTGCTGGGCC TCGACCCGCT GGAGCCGGTG GCGGTGCAGC CGAGCGCCAG CGACCGGGGC
ACGATCGTGC ACGACGTGCT GGGCGGCTTC GCGCAGCGCT TCCCCGAGGC GCTGCCCGCG
GATCCGCGCC TGCCCCTCTA CGACCTCGCG GTCAACGCCT TCGCGCCGAT CGCCGATGCC
TATCCGGAAC TCTACGCGGA GTGGTGGCCG CGCTTCGAGC GCATGGCGGC GTCCTTCCTC
GCCTGGGAGG TGGAGCGGCG GCCGGGCCTC AGGCGGGTCC ATGCCGAGAT CTCGGGCCGC
TGGCGGATCC CGATCGGCCC CGCCGAGGAC TTCACCCTGC GCGCCCGGGC CGATCGGATC
GAGGCGCGCC GGGACGGCGG CCACGTCATC GTCGACTTCA AGACCGGCCA GCCGCCGAGC
GCCAGGGAGG TCTTCGCCGG CTTCGCGCCG CAGCTCACCC TGGAGGCCGC GATGCTGCAG
GCGGGCGGCT TCCGCGATCT CGGCCCGGGA ACCGGCGCGC CGGAGCTGCT CTACGTGCGG
GCGAGCGGCG GCAAGGTGCC CCTCGACCCG GTGCCGCTCA AGCCGCCGCG GGGCGAGGCC
CGCTCGGTCG AGGAGCTGAT CGACGAGCAT GCGCGCCGCT TCCAGGGCCT CGTCGCCCGC
TTCCTGCGGG GCGAGGCGGC CTACCTGTCG CGGCCCTACC CGAAATACGC CCGCGCCTTC
TCGCCCTACG ACCACCTCGC GCGGGTGAAG GAATGGTCGC TGGTGGAGGG GGAGGGGGCG
TAG
 
Protein sequence
MSAARIFTIP PGAPFLATLA DALLDGTLVG PVAQGPLGLA AVTLFLPTRR ATRALAAELA 
ARCGPAVLLP RMTPLGEADE AELDLAALAP GECPEAVAHP PIPALERRLI LARLVQAWAA
GIDRRLLPMG EEVPFRVPSS PADAVGLAAD LEGLMDALTV EGLPWDEIGR AVEAEYSQYF
SLTLDFVRIA AEHWPAILAE RGVSDPVARG RALVLAEAAR LRRERPADPI VVAGSTGSIP
ATAALIGAIA AMPRGAVVLP GLDLALDEEG WAAIETGEAV AHGHPQAILH RLLRGLDCPR
AAVRPLGAPG PAARARAELL SQALRPAETT DAWADLDPGA REALARAGGA GLALVEAADE
REEALAIAVA LREALERPDC RAALITPDRG LARRVAAELG RWEIVAEDTA GQPLALSLAG
RLARLATDVA ALDAKPERVL ALLAHPMVRL GLARPALERA AAALEIGVLR GPAPAKGFAG
LAEALRVARG GERPHAPRPV RRLTQADWEA AADLVARLDR AFRDFAPRDF APDQEEGVRD
LVALAQAHRE TCDLLLDGPD APQDEPSVAV LDGLFDDLAL AQAGMLEGRF SDYPAFFTAL
ARERVVSARA ERPHPRLRIL GLLEARLLRV DRVVLGGLDE GVWPPKAETD AFLNRPMRAA
VGLSSPERRL GQTAHDLVQA LGCPDAVITR AHKREGSPTV PSRFLQRLRA FMGEAAWSGC
LAAGGRLRAL AASLDRGTEP LPPRPARPAP RPDPALFPRA LSVTEVETLV RDPYGIFARH
VLGLDPLEPV AVQPSASDRG TIVHDVLGGF AQRFPEALPA DPRLPLYDLA VNAFAPIADA
YPELYAEWWP RFERMAASFL AWEVERRPGL RRVHAEISGR WRIPIGPAED FTLRARADRI
EARRDGGHVI VDFKTGQPPS AREVFAGFAP QLTLEAAMLQ AGGFRDLGPG TGAPELLYVR
ASGGKVPLDP VPLKPPRGEA RSVEELIDEH ARRFQGLVAR FLRGEAAYLS RPYPKYARAF
SPYDHLARVK EWSLVEGEGA