Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_0474 |
Symbol | |
ID | 6133372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 556690 |
End bp | 557598 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641640797 |
Product | porin |
Protein accession | YP_001767472 |
Protein GI | 170738817 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.682837 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00624927 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGAGAC TTCTGAGTGC GTTTGCTGCT TTCACTGCGC TGACCGCGGC CGCTTCGGCG GCCGATCTGC CGCGCCGCGT CGCTCCTCCG GTGATTGCGC CGGTTCCGGT CTTCACCTGG ACGGGCTTCT ACGCCGGTTT CAACGCGGGC TACGGGTTCG ACGCGAGCAG CACCAACCCT GACGTGATCG TCCTGACCCG CGACCCGCGC GTGGTCGCCG GCCCGGCCGG CTCGGCCCTC GCCATCGGCT GGACGGGCGA CCGCAACACC GAGGGCTTCA GCGGCGGTGG CCAGATCGGC TACAATTACC AGTTCACGCC CGGCGCGGGC GTCGTGGTCG GCATCGAGGC GGACGCGCAG TACGTCGACT TCGGCCGCAA CCGCAACGCC TTCTCGTTCG CGATCCCGAA CCAGCCCGGC GCTCAGTTCA ACGGCGCCAA CGGCCTGCGC CTGTTCGACC CGCGCGGCCT GTCCGGGCTC GATTACTTCG GCACCGTGCG CGGCCGCCTC GGCTACGCCT TCGACCGCGT GCTGTTCTAC GGGACCGGCG GCTTCGCCTA TGGCGGCGGT GGCGGTACCA ATTTCGGCCT GCCGAACACC GACGATTTCC AGACCGGCTG GACGGCCGGC GGCGGCATCG AGTACGCGCT GCCCACCGAC TCGTTCCTGA ACTTCTTCCG GTCCTCGGCA GTGACGCTGA AGGTCGAAGG TCTCTACGTG AACCTCGACC GGAACCGCCG CAACGGCGCC TACGCGTTCG ACAACGCCGG CGTGATCGTC GCCGGCCTGC CGAACTCCAT CATCCTGAGC AACACCGCCG GCTTCCCGGC GGTTGGCAAC CTCGCTCGCC GCAACACGGA GTTCGCGGTG GTCCGCGCCG GCCTCAACTA CAAGTTCGGT ACCTGGTAG
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Protein sequence | MKRLLSAFAA FTALTAAASA ADLPRRVAPP VIAPVPVFTW TGFYAGFNAG YGFDASSTNP DVIVLTRDPR VVAGPAGSAL AIGWTGDRNT EGFSGGGQIG YNYQFTPGAG VVVGIEADAQ YVDFGRNRNA FSFAIPNQPG AQFNGANGLR LFDPRGLSGL DYFGTVRGRL GYAFDRVLFY GTGGFAYGGG GGTNFGLPNT DDFQTGWTAG GGIEYALPTD SFLNFFRSSA VTLKVEGLYV NLDRNRRNGA YAFDNAGVIV AGLPNSIILS NTAGFPAVGN LARRNTEFAV VRAGLNYKFG TW
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