| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_0455 |
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| Symbol | |
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| ID | 6132005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium sp. 4-46 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010511 |
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| Strand | + |
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| Start bp | 537749 |
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| End bp | 539710 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641640778 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_001767453 |
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| Protein GI | 170738798 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.70203 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0478579 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAGAC CGACCCTCAA GAGCGCGGCG ATCGTCGCCC ACGACCTCGT GGCGACCGCC
CTCGCCGTCA CGCTCACCTT CCTGATCCGC TTCGATGACG CGCGGCTGGC CGAGCGCCTC
GCGCATCTGC CGGTGCTGCT CGGCCCCTTC GTGCTCTATG CCGGGCTCGT CTATCGCTGG
TTCGGGCTCT ACCGCACCAA GTGGCGCTTC GCCTCGCTCC CCGACCTCGC CGCCATCGTG
CGGGCGGTCG CCGTCCTGGC CCTGTCGCTG CTGCTCCTGG ATTACGCGCT GGTCTCGCCC
GCCCTGTTCG GGATCTACTT CTTCGGCAAG ATCGCGATCG GGCTCTACTT CGTCCTGCAG
CTCTTCCTGC TCGGCGGCCC GCGCGTCGCC TTCCGCTACC TGAAATACAG CCGCTCGCGC
CAGAGCCACG CCCGCGCCGC GACGACGCCC GCGCTCCTCC TCGGCCGCGG CGCGGAGATC
GAGGTGGTGC TGCGCGCCAT CGAGGCCGGG ACGGTGCGCA AGCTCGCGGC CCAGGGCATC
CTCTCGCCCC GGGCCGAGGA TCGCGGCCAG AGCCTGCGCG GCGTGCCGGT GCTGGGCGCC
TTCGCCGACC TGGAGCAGGT CGTGGCGGAC CTCGCCGCCC GCGGCGTCGC GGTGCGGCGC
CTCGTGGCGA CGCCGAACGC CCTCACACCC GAGGCCGATC CCGACGGGCT CCTCGCCCGC
GCCCGCCGCC TCGGCCTGCC GCTCGCCCGC GTGACCACCC TCGGCGAGGG CCTGCGCGAC
GCCGAACTGG CGCCCCTCGA GATCGAGGAC CTGCTGCTGC GCCCGACCGT CCCGATCGAC
CGGCCGCGCC TGGAGCGCTT CCTCGCCGGC CAGCGCGTCG TGGTGACGGG GGGCGGCGGC
TCGATCGGCT CGGAGATCTG CGCCCGGGCC GTGGCCTTCG GCGCCTCGGC GCTCCTCGTC
GTGGAGAATT CCGAGCCCGC CCTGCACGGG GTGCTGACGC GGCCGGCCCT GGCCGAGAGC
GAGGCGGAGG TGAGCGGCGT CATCGCCGAC ATCCGCGACC GGGAGCGGCT CTTCCACGTC
CTGCGCGCGT TCCGCCCCGA CGCGGTCTTC CACGCCGCCG CGCTCAAGCA GGTGCCCTAC
CTGGAGCGCG ACTGGACCGA GGGCATCAAG ACCAACGTGT TCGGCTCGGT GAACGTGGCC
GACGCGGCGC TGGCGGCGGG CGCCCGCGCG CTGGTGATGA TCTCGACCGA CAAGGCGATC
GAGCCGGTCT CGCAGCTCGG CGTCACCAAG CGCTTCGCCG AGATGTACGC GCAGGCCCTC
GACGCGGCCG GCGGGCCGGC GCGGCTCGTG GCGGTGCGCT TCGGCAACGT GCTCGGCTCG
GTCGGCTCGG TGGTGCCGGT GTTCAAGGCG CAGATCGCCC GCGGCGGGCC GGTCACGGTC
ACCCATCCCG AGATGGTGCG CTACTTCATG ACCGTGCGCG AGGCCTGCGA CCTCGTGCTC
ACCGCCGCCT CCCACGCCGA CCGCGAGGGT CGCGACCCGC GGGCGGGCGA CCAGCGCGCC
GCCGTCTACG TGCTGAAGAT GGGCCAGCCG GTGCGGATCC GCGACCTCGC CGAGCGCATG
ATCCGCCTCG CCGGCTTCGA GCCGGGCCTC GACATCGAGA TCGCCGTGAC GGGCGCGCGG
CCCGGGGAGC GCCTGAACGA GATCCTCTTC GCCCGCGACG AGCCGATGGT GACCCTCGAC
GGGATCGAGG GGGTCATGGC GGCCAAGCCC GTCTTCGCCG ACCGGGCGCA GCTCGCGCGC
TGGCTCGAGC GGCTGCGCGC GGCGGTGGCG CAGGCCGACC GCGCGGCGGC CGAGGCGGTG
TTCGCGGAGG CGGTGCCGGA TTTCGCCCGG CGGCCGGGCG CGGCGCGCGA GGCGCCGGCG
GCCGAACTGG CGCCGCGGGA TGTCGGGGCG GGCGGGGCGT GA
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| Protein sequence | MRRPTLKSAA IVAHDLVATA LAVTLTFLIR FDDARLAERL AHLPVLLGPF VLYAGLVYRW
FGLYRTKWRF ASLPDLAAIV RAVAVLALSL LLLDYALVSP ALFGIYFFGK IAIGLYFVLQ
LFLLGGPRVA FRYLKYSRSR QSHARAATTP ALLLGRGAEI EVVLRAIEAG TVRKLAAQGI
LSPRAEDRGQ SLRGVPVLGA FADLEQVVAD LAARGVAVRR LVATPNALTP EADPDGLLAR
ARRLGLPLAR VTTLGEGLRD AELAPLEIED LLLRPTVPID RPRLERFLAG QRVVVTGGGG
SIGSEICARA VAFGASALLV VENSEPALHG VLTRPALAES EAEVSGVIAD IRDRERLFHV
LRAFRPDAVF HAAALKQVPY LERDWTEGIK TNVFGSVNVA DAALAAGARA LVMISTDKAI
EPVSQLGVTK RFAEMYAQAL DAAGGPARLV AVRFGNVLGS VGSVVPVFKA QIARGGPVTV
THPEMVRYFM TVREACDLVL TAASHADREG RDPRAGDQRA AVYVLKMGQP VRIRDLAERM
IRLAGFEPGL DIEIAVTGAR PGERLNEILF ARDEPMVTLD GIEGVMAAKP VFADRAQLAR
WLERLRAAVA QADRAAAEAV FAEAVPDFAR RPGAAREAPA AELAPRDVGA GGA
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