Gene M446_0428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_0428 
Symbol 
ID6131694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp512081 
End bp513307 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content77% 
IMG OID641640753 
ProductRND family efflux transporter MFP subunit 
Protein accessionYP_001767429 
Protein GI170738774 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0182364 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCGCC TGCGCCTCCT CGCCGGGACC CTCGCCGCCC TCGCCCTCGC GCCCCTGGTA 
TCCTGGACTC AGGAGTCCCG GGCCGCAGAG GCCGCGGCAC CGGCCGCGCG GGCCGAGGTG
CCCGTGCCCG CCGTGACCGT GGTGGTGGCG GCCGAGCGCG AGATCGTCGA GCGCACGGTC
GTCACCGGCA CCCTGGTGCC GCGCGACGAG ATCATGGTCT CGCCCGAGAT CGAGGGCTGC
CGCATCACCG AACTCCTGGT CGAGGAGGGG GATCGGGTCG CCAGGGGCGC GGTGCTCGCC
CGCCTGTCCC GGGAGATGAT CGACACCCAG CTCGCCCAGA ACGCCGCCGC CATCGCCCGG
GCCGAGGCCG CCGTGGAGCA GGCCCGCAGC ACCATCGTGC AGGCCGAGGC GGCGCAGGTC
GAGGCGGCCC TGGCGCTGGA GCGCACCCGG ACCCTGATCC GGACCGGCAA CGCGACCGAG
GTGCAGATGG AGCAGCGCAC CTCGGCGGCG CGCTCGGCGG AGGGGCGGCT CGCCGCGGCC
CGCAACGGGC TCTCGATCGC CGAGGCCGAG CTCCTCCAGG CCCGGGCCCA GCGCCGGGAA
CTCGACCTCA AGCTCGCCCG CACGGAGATC CGCGCGCCCG AGGGCGGCAT CGTCAGCCGC
CGCACCGCCC GGGTCGGCGC CACCGCGAGC GCGACCGCCG AGCCGCTGTT CCGGCTGATC
GCCCGCGGCG AGATCGAACT CGAGGGCGAG GTGACCGAGA CCGGCATGCC GCGCCTGAAG
CCCGGCGCGC CCGCCCAGCT CGATCTTGAC ACGCCGGACG GGTCCGTCGG CGTGCCGGGC
CGCGTGCGCG CGGTCTATCC GGAGATCGAC CGCGCGACCC GCCTCGGCAA GGTGCGCATC
CGCCTCGAAC CCGATCCGCG CCTGCGCATC GGCGCCTTCG CCCGCGGCAG CGTCGAGGTG
GCGCGCCGCA CCGGCGTCGC GGTGCCGGTC GCCTCGGTCG TCTACGGCAA TGGCGGGGCG
ACCGTCCTCG TCGTGGCGGG CGACCGGGTC GAGGCGCGCC AGGTCCGCAC CGGCCTCTCG
GCGGCGGGCT TCATCGAGAT CCGCGACGGG GTGCGGGCCG GCGACGCCGT CGTGGCCCGG
GCCGGCAGCT TCCTGCGCGA CGGGGACCGG GTCCGCCCGG TCTTTCCCGC CCAGCAGGTC
AGCGCCGACG CCCTCCCGCG CCCCTGA
 
Protein sequence
MPRLRLLAGT LAALALAPLV SWTQESRAAE AAAPAARAEV PVPAVTVVVA AEREIVERTV 
VTGTLVPRDE IMVSPEIEGC RITELLVEEG DRVARGAVLA RLSREMIDTQ LAQNAAAIAR
AEAAVEQARS TIVQAEAAQV EAALALERTR TLIRTGNATE VQMEQRTSAA RSAEGRLAAA
RNGLSIAEAE LLQARAQRRE LDLKLARTEI RAPEGGIVSR RTARVGATAS ATAEPLFRLI
ARGEIELEGE VTETGMPRLK PGAPAQLDLD TPDGSVGVPG RVRAVYPEID RATRLGKVRI
RLEPDPRLRI GAFARGSVEV ARRTGVAVPV ASVVYGNGGA TVLVVAGDRV EARQVRTGLS
AAGFIEIRDG VRAGDAVVAR AGSFLRDGDR VRPVFPAQQV SADALPRP