Gene M446_0406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_0406 
Symbol 
ID6130977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp492072 
End bp493007 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content74% 
IMG OID641640733 
Productporphobilinogen deaminase 
Protein accessionYP_001767409 
Protein GI170738754 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0181] Porphobilinogen deaminase 
TIGRFAM ID[TIGR00212] porphobilinogen deaminase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.121842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.321807 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCATC GCCCCCTGCG CATCGGCACC CGCGGCAGCC CGATGGCGCT CGCGCAGACC 
GGCATGGTCC GCGACCGCAT CGCCGCCGCG CATCCGCACC TCGCCGAGCC GGGGGCGATG
GAGCTCGTCG TCGTCAACAC GGTGGCGGAC CGGATCCTCG ACCGGCCGCT CTCGGCGATC
GGCGGCAAGG GTCTGTTCAC CAAGGAGCTG GAACAGGCGC TGTTCGCCGG CGAGATCGAC
GTCGCCGTGC ACTCGATGAA GGATGTCGAG ACCTGGCTGC CGGACGGGCT CGTCATCGCC
TGCATCCTGG AGCGGGACGA CCCCCGCGAC GCCTTCCTGT CGCTCGCTTC CGGCAGCCTC
GCCGAGCTGC CCGCCGGCGC CCGCGTCGGC ACCTCGTCCC TGCGGCGGGG CGCGCAGGTG
CTGATGCGCC GGCCCGACCT GCGGATCGTG CCCCTGCGCG GCAACGCCAA TACCCGCATC
CGCAAGCTGG AGGAGGGGGT CTGCGACGCG ACCCTCCTCG CCATCGCGGG GCTGGAGCGG
CTCGGGCTGG CGCATCTCGC CAGGACCGTG ATCCCGGTCG AGGAGATGCT GCCGGCCGTG
GCGCAGGGCG CGCTCGGCAT CGAGTGCCGC GCGGCGGACG AGGACGTCAT CGCCCTGCTG
CAGGCGGTGG CCTGCCCGCG CACGACGACG GCGCTGGCCG CCGAGCGGGG CCTGCTCGCG
GAACTCGACG GGTCCTGCCG CACGCCGATC GCGGCGCTGG CGCAGATCGA CGGCGACCGG
CTGACCCTCG ACGGGCTGCT GTTCCTGCCG GACGGGAGCG CGCACTGGGC CACGACCCGC
AGCGGCCCGG CCGCGGAGGC CGCTTCGATC GGCCGGGAGG CCGGGGCGGA CCTGAAGGCG
CAGGCGGGCG AGACCTATCG CCGGCACCTG CAATAG
 
Protein sequence
MAHRPLRIGT RGSPMALAQT GMVRDRIAAA HPHLAEPGAM ELVVVNTVAD RILDRPLSAI 
GGKGLFTKEL EQALFAGEID VAVHSMKDVE TWLPDGLVIA CILERDDPRD AFLSLASGSL
AELPAGARVG TSSLRRGAQV LMRRPDLRIV PLRGNANTRI RKLEEGVCDA TLLAIAGLER
LGLAHLARTV IPVEEMLPAV AQGALGIECR AADEDVIALL QAVACPRTTT ALAAERGLLA
ELDGSCRTPI AALAQIDGDR LTLDGLLFLP DGSAHWATTR SGPAAEAASI GREAGADLKA
QAGETYRRHL Q