Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_0406 |
Symbol | |
ID | 6130977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 492072 |
End bp | 493007 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641640733 |
Product | porphobilinogen deaminase |
Protein accession | YP_001767409 |
Protein GI | 170738754 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.121842 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.321807 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCATC GCCCCCTGCG CATCGGCACC CGCGGCAGCC CGATGGCGCT CGCGCAGACC GGCATGGTCC GCGACCGCAT CGCCGCCGCG CATCCGCACC TCGCCGAGCC GGGGGCGATG GAGCTCGTCG TCGTCAACAC GGTGGCGGAC CGGATCCTCG ACCGGCCGCT CTCGGCGATC GGCGGCAAGG GTCTGTTCAC CAAGGAGCTG GAACAGGCGC TGTTCGCCGG CGAGATCGAC GTCGCCGTGC ACTCGATGAA GGATGTCGAG ACCTGGCTGC CGGACGGGCT CGTCATCGCC TGCATCCTGG AGCGGGACGA CCCCCGCGAC GCCTTCCTGT CGCTCGCTTC CGGCAGCCTC GCCGAGCTGC CCGCCGGCGC CCGCGTCGGC ACCTCGTCCC TGCGGCGGGG CGCGCAGGTG CTGATGCGCC GGCCCGACCT GCGGATCGTG CCCCTGCGCG GCAACGCCAA TACCCGCATC CGCAAGCTGG AGGAGGGGGT CTGCGACGCG ACCCTCCTCG CCATCGCGGG GCTGGAGCGG CTCGGGCTGG CGCATCTCGC CAGGACCGTG ATCCCGGTCG AGGAGATGCT GCCGGCCGTG GCGCAGGGCG CGCTCGGCAT CGAGTGCCGC GCGGCGGACG AGGACGTCAT CGCCCTGCTG CAGGCGGTGG CCTGCCCGCG CACGACGACG GCGCTGGCCG CCGAGCGGGG CCTGCTCGCG GAACTCGACG GGTCCTGCCG CACGCCGATC GCGGCGCTGG CGCAGATCGA CGGCGACCGG CTGACCCTCG ACGGGCTGCT GTTCCTGCCG GACGGGAGCG CGCACTGGGC CACGACCCGC AGCGGCCCGG CCGCGGAGGC CGCTTCGATC GGCCGGGAGG CCGGGGCGGA CCTGAAGGCG CAGGCGGGCG AGACCTATCG CCGGCACCTG CAATAG
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Protein sequence | MAHRPLRIGT RGSPMALAQT GMVRDRIAAA HPHLAEPGAM ELVVVNTVAD RILDRPLSAI GGKGLFTKEL EQALFAGEID VAVHSMKDVE TWLPDGLVIA CILERDDPRD AFLSLASGSL AELPAGARVG TSSLRRGAQV LMRRPDLRIV PLRGNANTRI RKLEEGVCDA TLLAIAGLER LGLAHLARTV IPVEEMLPAV AQGALGIECR AADEDVIALL QAVACPRTTT ALAAERGLLA ELDGSCRTPI AALAQIDGDR LTLDGLLFLP DGSAHWATTR SGPAAEAASI GREAGADLKA QAGETYRRHL Q
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