Gene M446_0247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_0247 
Symbol 
ID6134122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp302802 
End bp304724 
Gene Length1923 bp 
Protein Length640 aa 
Translation table11 
GC content75% 
IMG OID641640574 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_001767252 
Protein GI170738597 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0678153 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACCG ACGAGACGAA CCTTCGGAGG GGCATGGACA GGGAGGCGGC GCGCGGCACC 
ATCCTGGCGG TCGACGACGA GCCGGACATC CTCGTCGCGC TCGAGGACCT CCTGGAGGAC
GAGTTCCGGG TGCTGACGGC GAGCCGCCCG GCCGACGCGC TCGCCCTGCT CGCCGCCGAG
CCGGACGTCG CCGTCATCGT CTCCGACCAG CGCATGCCGG GCATGACCGG CGACGCGCTG
CTGGCGCGGG CCCGCGAGGT CAGCGACGCG CAGGCGATCC TCCTCACCGG CTACGCCGAT
CTCTCGGCCG TGACCTCGGC CCTGAACCGC GGCGGCATCA CCGGCTACGT GACGAAGCCC
TGGGACGCGG CCCTGCTGCG CGGCGCCGTG CGGGCCGCCT ACGAGCGCTG CCGGCTCGGG
CGCGACCTCG CCACGGAGCG CGCCCTCCTG CGCGGGCTCC TCGACCATGC GGGGGACGCG
ATCGCCTTCA AGGACCCGCA GGGACGCTTC GTGCGCCTCA ACGCCGCCAA GGCCGCCCGG
CTCGGCGCCG CCGTCGAGGA TTGCCTCGGC GAGCCCGAGA GCCGCTTCCT CGATCCCGAG
ACGGCCGCCC GCGTCGAGGC CGCGGACCGG GAGGCCGCCG CCGGCCTTCA CCCGGTCGAG
GCGACGATCG CGGGCGGTCC CGCCGCCGCC CCGACCTGGA CCCAGGTGGT GCGGGTGCCG
ATCCGCGACG CGCACGGGGC GCTCGCGCAT CTCGCCACGA TCGAGCGGGA CGTCACCGAG
CAGAAGCAGC TCGAAGCCCG CCTGCGCCAG GCCGACAAGA TGCAGGCGCT CGGCACCCTG
GCGGGCGGCG TCGCGCACGA TTTCAACAAC CTCCTCACCG CCATCATGGG CAGCCTCGAA
CTGGCGCTGC CGAAGGTCGC GGGCGACGCG CGGCTGACGC GGCTGATGAC CAACGCCGCG
CAGGCCGCCC AGCGCGGCGC CGCCCTGACC AAGCGGCTCC TCAGCTTCAG CCGGCAGCGG
GACCTGCAGG CCCGGGTGGT CGACCTCAAC GGCGTGATCC GGGGGATGGA CGACCTGCTC
GGGCGCAGCC TCGGCGGCTT CGTGCAGGTC GACCACGCGC TCGCGCCCGA CCTCTGGCCG
GCGCGGGTCG ATCCCGAGCA GCTCGAACTC GCGATCCTCA ACCTCTGCAT CAACGGCCGC
GACGCGATGC CGGATGGCGG GATCGTCACC CTGTCGACCC GCAACGTCGT GGTGGCGGGC
AGCCCCGATC CCGACCTGCC GGACGGCGAC TACGCGGTGA TCGCGATCGC CGACACGGGG
ACCGGCATCC CGCCCGAGAT CCTGAGCCGG GTCTTCGAGC CCTTCTTCAC CACCAAGGCG
CAGGGCCAGG GCACCGGGCT CGGCCTCGCC ATGGTGTTCA GCCTGCTGCA GCAATCGGGC
GGCACGATCC GCATCGACAC CGAGGTCGGG CGCGGGACGA GGGTCGACCT CTACCTGCCG
CGGGCGCACG AGCCGGTCGA GACCGACGAG GCCCGCGCGG GGGCGGCGGT GCCGCCGCGG
CGGCGGGCCC GCATCCTGGT GGTCGACGAC GACCCGCAGG TGCGCCACGT GACCGCCTCC
TTCCTGAGCG GCTTCGGGCA CGAGGCCGTG GAGGTGCCGG AGGCCGAGGC GGCCCTGGCG
CGGATCGAGG CGGAGCCCTT CGACCTCGTC GTCGCCGACC TCGCCATGCC GGGCATGACC
GGCCTCGACC TCGCCGAGGC GGTGCGCGGG CGCCGGCCGG ACCTGCCCTT CCTGATCGTC
ACCGGTCACG CCGAGGCGGC GCGCATCCCG CACGCCTACG CGGTGCTGGA GAAGCCGTTT
CCCTCGGGCG AGCTCGGGAC CCGGGTGGCG GCGCTCCTGG CCGACGCGCC CGAGCGCCGC
TAG
 
Protein sequence
MITDETNLRR GMDREAARGT ILAVDDEPDI LVALEDLLED EFRVLTASRP ADALALLAAE 
PDVAVIVSDQ RMPGMTGDAL LARAREVSDA QAILLTGYAD LSAVTSALNR GGITGYVTKP
WDAALLRGAV RAAYERCRLG RDLATERALL RGLLDHAGDA IAFKDPQGRF VRLNAAKAAR
LGAAVEDCLG EPESRFLDPE TAARVEAADR EAAAGLHPVE ATIAGGPAAA PTWTQVVRVP
IRDAHGALAH LATIERDVTE QKQLEARLRQ ADKMQALGTL AGGVAHDFNN LLTAIMGSLE
LALPKVAGDA RLTRLMTNAA QAAQRGAALT KRLLSFSRQR DLQARVVDLN GVIRGMDDLL
GRSLGGFVQV DHALAPDLWP ARVDPEQLEL AILNLCINGR DAMPDGGIVT LSTRNVVVAG
SPDPDLPDGD YAVIAIADTG TGIPPEILSR VFEPFFTTKA QGQGTGLGLA MVFSLLQQSG
GTIRIDTEVG RGTRVDLYLP RAHEPVETDE ARAGAAVPPR RRARILVVDD DPQVRHVTAS
FLSGFGHEAV EVPEAEAALA RIEAEPFDLV VADLAMPGMT GLDLAEAVRG RRPDLPFLIV
TGHAEAARIP HAYAVLEKPF PSGELGTRVA ALLADAPERR