Gene M446_0186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_0186 
Symbol 
ID6133543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp229786 
End bp232359 
Gene Length2574 bp 
Protein Length857 aa 
Translation table11 
GC content64% 
IMG OID641640517 
ProductGAF sensor signal transduction histidine kinase 
Protein accessionYP_001767196 
Protein GI170738541 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCGAC GCCATGAAAA CGAGCCGGCT AAGGGCCGGC GCGCGAACGA GCGTAAGGGC 
TGTGCCAAGG CTCTCACGAC CGCGACCCCG TCAGTCGCCG ATCTGCAGAA GCGGGTTGAC
GTTCTCGCTT GTGAGTTGAG GGCGGCACTT GAGCGTCAGA CTGCTACCGC TGAGGTAATT
GAATTCATCA ATTCAGACAC CAAAGATCTT GCATCTGCAT TTGCGATGAT CTTGGATAAG
ATGCACATCC TGTGCGGAGT TTGCCACGGG AGCTTGCAGC TTTATGATGG AGAGAAGTTC
CGCGCTGTTG CGACGCACGG AATGGTGAAG GCGTTTGCCG ATCGGCTCCG TGAGGGATTC
ACCCCAGGCC CCCATCACCC AAGCCAACAA TTGCTGCAAG GAGCACGCTT TACCCAAGTT
CCCGACTGCG CCGAGAGCGA CGATCCGACA GTCCGTGCGG CCTTTGAACT CGACGGCATC
CGGACCGTGT TGCTTACTCC CTTGCGCAAG GACGGAAGAC TGATCGGCCA GATTGCCGCC
GCCCGACGGG ATGGAAATCC CTTTACCGAG AACGAGATCA CGCTGCTTGA GAACTTCGGC
GCTCAGGCCG TGATCGCCGT GGAGAACGCG CGGCTTCTCA ACGAAGCGCA GGCCAAGACA
CGTGATCTCG AGGCGTCGCT GCAACAGCAG ACGGCTGTCG GCGACGTGCT TAAGATCATC
AGTAGCTCAA CCTTCGAGCT GCAGCCCGTG CTCGACACGT TGGTCGAAAC CGCCGCGCGG
CTATGTGAGG CCGACATGGC CTTCATCCTG CGTCGCGAGG GTGAGATTTA CAAAGCCGGC
GCAGCGGTCG GCTACTCAGA AGATTATATT GAGTTCCTCA AGAGCCATCC GATTCCGGTC
GATAGAGGCA CAGTCACGGG TCGCGCCGCG ATGGAGCGGC GGACGGTCCA TATCCTCGAT
GTTGCCGCCG ATCCCGAATA CACGCTGCGC ACAGCGACGG CCCTGGCTCA TCAGCACACA
GCCCTTGGGG TTCCCCTGCT GCGCGAGAAC GAGCCGATCG GTGTGATCGT CATCGCGCGC
CAGCGCGTGG AGCCCTTCAC ACAAGCACAG ATCGATCTGG TCACGACCTT TGCCGACCAG
GCCGTGATCG CGATCGAGAA CGCTCGCCTG TTCAACGAGG TGCAGGGCAA AACGCGCGAC
CTCGAAGAAG CGCTGCAGCA GCAGACCGCG ACGAGCGAGG TGCTGCAGAC GATCAGCCGC
TCGGTCTTCG ATCTGCCGAC CATCCTCAAC ACGCTGCTCC ACTCGGCCAC TCGGCTCTGC
CGAACCGAAA CGTCGGCTCT CTACCTGCTC CATGAGGGCC GCCTTCATCT GGAAGCCTCC
ACAGCCAATC GACCGGAATG GGTGGCTTAC AAGCGCGCTC ATCCCCAGCC GCTGACCCGA
GATGTGCCGA GCAGCCGCGC GGCCGTCACC GGCCAGATCG ACCATGTGCC CGACATCCTT
CAGGACCCGG AACTCACGAG CGCATCGGAG CTCCATCGCA TTGGCGGCTA CCGCGCCACG
CTCAACGTCC CGCTTGTGCG GGAAGGGTCC GTGATCGGGG TTCTCAGCCT CGCCCGGGAC
GAACCGGGAC CCTTCGCGCC CCGCCAGATC GCCGTGGCCA AGACCTTCGC CGACCAGGCG
GTCATCGCCA TCGCCAATGC CCGCCTGTTC AACGAGGTCG AGGCAAAGTC GCGGGAGTTG
CAGGCCTCCC TGGACAACCT GTGCGCAACC CAGGATCGCC TCGTGCAGTC CGAGAAGCTC
GCCTCGCTCG GCCAGCTCAC CGCCGGCATC GCGCACGAGA TCAAGAACCC GCTCAACTTC
GTGAACAATT TCGCCGCCCT GTCGGCCGAG TTGATCGACG AGCTGAACGA GGTGCTGGCC
CCCCCGGCCC TCGACGGTCC CGTCCGGGAG GAGGTCGACG AACTTACCGG CCTGTTGCGG
GGCAATCTCG AGAAGGTGGT CCAGCACGGC AAGCGCGCGG ATTCGATCGT CAGGAACATG
CTGCTGCACT CCCGCGAGGG CTCGGGCGAG CGCCGGCGTG TCGACGTCAA CGCCCTCGTG
GAGGAGAGCC TGAACCTCGC CTATCACGGC GCCCGCGCCG AGAAGCCCGG CTTCACCGTG
ACCCTCGCCC GCGACCTCGA CCCCGGGGCG GGGGGCGCCG ACCTCTACCC GCAGGAGATC
GCGCGGGTGC TGCTCAATCT GATCTCGAAC GGCTTCCACG CCGTGACCAA GCGCAAGGCG
GAGACGGAGG CGGCCGGCTA TGAGCCGACG CTTCTCGTCG CGACCTGTGA TCGCGGGGAC
AAGATCGAGA TCACGATTCG CGACAACGGC ACCGGCATAC CCGACGCGGT GAGGGCGAAG
ATGTTCAACC CCTTCTTCAC CACGAAGCCG GCCGGAGAGG GCACCGGCCT CGGCCTCTCG
CTCAGCCACG ACATCGTGGT CAAGCAGCAC GGCGGCAGCA TCGAGGTCGA GACCGAGCCC
GGCGCCTTCA CGGCCTTCCG CATCTTGCTG CCCCGCGGCG GCCCCACCCA ATAG
 
Protein sequence
MRRRHENEPA KGRRANERKG CAKALTTATP SVADLQKRVD VLACELRAAL ERQTATAEVI 
EFINSDTKDL ASAFAMILDK MHILCGVCHG SLQLYDGEKF RAVATHGMVK AFADRLREGF
TPGPHHPSQQ LLQGARFTQV PDCAESDDPT VRAAFELDGI RTVLLTPLRK DGRLIGQIAA
ARRDGNPFTE NEITLLENFG AQAVIAVENA RLLNEAQAKT RDLEASLQQQ TAVGDVLKII
SSSTFELQPV LDTLVETAAR LCEADMAFIL RREGEIYKAG AAVGYSEDYI EFLKSHPIPV
DRGTVTGRAA MERRTVHILD VAADPEYTLR TATALAHQHT ALGVPLLREN EPIGVIVIAR
QRVEPFTQAQ IDLVTTFADQ AVIAIENARL FNEVQGKTRD LEEALQQQTA TSEVLQTISR
SVFDLPTILN TLLHSATRLC RTETSALYLL HEGRLHLEAS TANRPEWVAY KRAHPQPLTR
DVPSSRAAVT GQIDHVPDIL QDPELTSASE LHRIGGYRAT LNVPLVREGS VIGVLSLARD
EPGPFAPRQI AVAKTFADQA VIAIANARLF NEVEAKSREL QASLDNLCAT QDRLVQSEKL
ASLGQLTAGI AHEIKNPLNF VNNFAALSAE LIDELNEVLA PPALDGPVRE EVDELTGLLR
GNLEKVVQHG KRADSIVRNM LLHSREGSGE RRRVDVNALV EESLNLAYHG ARAEKPGFTV
TLARDLDPGA GGADLYPQEI ARVLLNLISN GFHAVTKRKA ETEAAGYEPT LLVATCDRGD
KIEITIRDNG TGIPDAVRAK MFNPFFTTKP AGEGTGLGLS LSHDIVVKQH GGSIEVETEP
GAFTAFRILL PRGGPTQ