| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_0166 |
|---|
| Symbol | |
|---|
| ID | 6132230 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 186241 |
|---|
| End bp | 186963 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641640500 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001767179 |
|---|
| Protein GI | 170738524 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAGTG CCTCCGCCAT CGTGCGCTGC AGCGGCATCA CGAAGACGTT CACCGCGGGC
GAAGACCTCG TCACGGTGCT GCACGGGATC GACTTCGAAC TGCCCGCAGG TGAACTCACG
ATGCTGGTCG GTCCGTCCGG TTGCGGCAAA ACCACCCTGA TCTCGATCAT CGCCGGCATC
CTGAGCCCGA CCTCCGGGGA GGTCTCGATC TGCGGCGCGT CGGTCACCCG CATGGGGGAC
CGGGAGAGAA CAGCCTTCCG ACGCCGGACG ATCGGCTTCA TCTTCCAGCA GTACAACCTC
CTGCCGGCGC TGACCGTCGC CGAGAACGCG GCGATCCCGC TGGTCGCCGC GGGGATGCCG
ATGAGGCGGG CGCTGGAGCG GGCAATCCCC ATTCTGACCC GCCTCGGAAT GGCCGGCCAC
GTCGGCAAGA CCCCGAATCA GCTCTCGGGC GGGCAGCAGC AGCGGGTCGC GATCGCGCGG
GCGCTGGTCC ACGAGCCCCG GCTGATCGTC TGCGACGAGC CGACCGCTGC GCTCGACGCC
GACACCGGTC GATCGGTCCT CGAGCTCCTC AAGGCCGCCG CGCTTGCGGA GGACCGGGCG
GTCATCGTCG TCACCCATGA CAGCCGAATC TACTCCTTCG CGGACCGGAT CACGGCCATG
GAGGACGGGC GAATCCGCTC GGCCCGCGTC GCGCAGGCGA GGATGGGATC GGAGGTGGCG
TGA
|
|---|
| Protein sequence | MGSASAIVRC SGITKTFTAG EDLVTVLHGI DFELPAGELT MLVGPSGCGK TTLISIIAGI
LSPTSGEVSI CGASVTRMGD RERTAFRRRT IGFIFQQYNL LPALTVAENA AIPLVAAGMP
MRRALERAIP ILTRLGMAGH VGKTPNQLSG GQQQRVAIAR ALVHEPRLIV CDEPTAALDA
DTGRSVLELL KAAALAEDRA VIVVTHDSRI YSFADRITAM EDGRIRSARV AQARMGSEVA
|
|---|
| |