Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_0165 |
Symbol | |
ID | 6132229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 185004 |
End bp | 186239 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641640499 |
Product | secretion protein HlyD family protein |
Protein accession | YP_001767178 |
Protein GI | 170738523 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGGCA GTTCCGTCCT GCTCCGCTTC GGCGTTCCCG CGCTGGCCGC CGGCCTGTTC GGCTTCACCG CCTGGTCCGT TTCGGCGAAG TACGATCCCC GGCCGATCAC CGAGCCGGTG ATCGCGGCGC CGGCCAACTC CTACGCCCAG GGGGTGTCCG CCGCCGGGAT CATCGAGCCG GCGAGCGAGG TGGTCGCGAT CGCCACCGAG CGCAGCGGCG TCGTCTCCCG CGTGGAGGTC GTGGCCGGCG CCGGGGTCAC GGCCGGACGG CCGCTCTTCT CCGTCGACGA TCGTGAGGTC CGGGCCGTTG TTGCGCGGCA TGAGGGCGCG CTCGCGGCGG CCGAGGCCCT CCTGAGCTCG GCCGACCTGA ACATCGCGAT GCAGCGTCAC AAGATCTCGC AGGCGGCGGC GGAACTCGAG AACGCTCAGG CTGAATCGAG CCGGGCGGAG CTCGACCGCC TCCGGTACGC GTCGCTCGCC CGCGGGTCCT GGGTTTCGCG CCAGCGCTAC GAGGCGGCCA TCGCGGATGC GGGGAAGGCC GCCGCGGCGG TCGCGGCCGC CGAGGCCGCG GTCGCCGCAG CGAAGCAGCA GAGCAAGGTC CTGACCGCCA AGCGGCTCGA GGCGGAGGCC AATGTCGCCC AGTCGAAGGC GGCGCTGGAG CAGGCGCGCG TCGACCTCGA CAGGACGGTC GTGAAGGCGC CGATCGACGG CAAGATCCTC AAGGTCAATG TCCGCGTCGG CGAGTACGCG CAGGCGGGCG CGCTGTCCTC CCCGCTCATG ATCATGGGAA GCGCGGATCT CCTGCATGTC CGCGCCGATG TCGACGAGGC CGACAGCTGG AGGATCAACG CGGGCAGCCC GGCCGTCGCG CGGCTGCGCG GCAACCCGAA GATCTCCGCC CCGCTGTCCT TCGTGCGCAT CGAGCCCTAC GTGGTGCCGA AGCGGTCGCT CACCGGCGCC AGCACAGAGC GCGTCGACAC GCGGGTTCTC CAAGTGATCT ACGCGCTGCA GGTTTCCGAC TTCCCGGCCT TCGTCGGCCA GCAGGTCGAC GTGTTCATCA AGACCGATTC GCCTCAGGGC GTCGCGGAAC TTCGCCGAGA TCCCGCGGAG GTGGCGCGGC CGCTGCCTGC CTGCCCGCAA TCTCTCGCGA CGCACCGGGG ATGCCGCATA CCTGGGCAGG CGGACGCCCC GTGGCAACAA GCCCAGGGCA CCCAGATCGG CCAACCCGCC GATTGA
|
Protein sequence | MTGSSVLLRF GVPALAAGLF GFTAWSVSAK YDPRPITEPV IAAPANSYAQ GVSAAGIIEP ASEVVAIATE RSGVVSRVEV VAGAGVTAGR PLFSVDDREV RAVVARHEGA LAAAEALLSS ADLNIAMQRH KISQAAAELE NAQAESSRAE LDRLRYASLA RGSWVSRQRY EAAIADAGKA AAAVAAAEAA VAAAKQQSKV LTAKRLEAEA NVAQSKAALE QARVDLDRTV VKAPIDGKIL KVNVRVGEYA QAGALSSPLM IMGSADLLHV RADVDEADSW RINAGSPAVA RLRGNPKISA PLSFVRIEPY VVPKRSLTGA STERVDTRVL QVIYALQVSD FPAFVGQQVD VFIKTDSPQG VAELRRDPAE VARPLPACPQ SLATHRGCRI PGQADAPWQQ AQGTQIGQPA D
|
| |