Gene M446_0165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_0165 
Symbol 
ID6132229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp185004 
End bp186239 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content71% 
IMG OID641640499 
Productsecretion protein HlyD family protein 
Protein accessionYP_001767178 
Protein GI170738523 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCA GTTCCGTCCT GCTCCGCTTC GGCGTTCCCG CGCTGGCCGC CGGCCTGTTC 
GGCTTCACCG CCTGGTCCGT TTCGGCGAAG TACGATCCCC GGCCGATCAC CGAGCCGGTG
ATCGCGGCGC CGGCCAACTC CTACGCCCAG GGGGTGTCCG CCGCCGGGAT CATCGAGCCG
GCGAGCGAGG TGGTCGCGAT CGCCACCGAG CGCAGCGGCG TCGTCTCCCG CGTGGAGGTC
GTGGCCGGCG CCGGGGTCAC GGCCGGACGG CCGCTCTTCT CCGTCGACGA TCGTGAGGTC
CGGGCCGTTG TTGCGCGGCA TGAGGGCGCG CTCGCGGCGG CCGAGGCCCT CCTGAGCTCG
GCCGACCTGA ACATCGCGAT GCAGCGTCAC AAGATCTCGC AGGCGGCGGC GGAACTCGAG
AACGCTCAGG CTGAATCGAG CCGGGCGGAG CTCGACCGCC TCCGGTACGC GTCGCTCGCC
CGCGGGTCCT GGGTTTCGCG CCAGCGCTAC GAGGCGGCCA TCGCGGATGC GGGGAAGGCC
GCCGCGGCGG TCGCGGCCGC CGAGGCCGCG GTCGCCGCAG CGAAGCAGCA GAGCAAGGTC
CTGACCGCCA AGCGGCTCGA GGCGGAGGCC AATGTCGCCC AGTCGAAGGC GGCGCTGGAG
CAGGCGCGCG TCGACCTCGA CAGGACGGTC GTGAAGGCGC CGATCGACGG CAAGATCCTC
AAGGTCAATG TCCGCGTCGG CGAGTACGCG CAGGCGGGCG CGCTGTCCTC CCCGCTCATG
ATCATGGGAA GCGCGGATCT CCTGCATGTC CGCGCCGATG TCGACGAGGC CGACAGCTGG
AGGATCAACG CGGGCAGCCC GGCCGTCGCG CGGCTGCGCG GCAACCCGAA GATCTCCGCC
CCGCTGTCCT TCGTGCGCAT CGAGCCCTAC GTGGTGCCGA AGCGGTCGCT CACCGGCGCC
AGCACAGAGC GCGTCGACAC GCGGGTTCTC CAAGTGATCT ACGCGCTGCA GGTTTCCGAC
TTCCCGGCCT TCGTCGGCCA GCAGGTCGAC GTGTTCATCA AGACCGATTC GCCTCAGGGC
GTCGCGGAAC TTCGCCGAGA TCCCGCGGAG GTGGCGCGGC CGCTGCCTGC CTGCCCGCAA
TCTCTCGCGA CGCACCGGGG ATGCCGCATA CCTGGGCAGG CGGACGCCCC GTGGCAACAA
GCCCAGGGCA CCCAGATCGG CCAACCCGCC GATTGA
 
Protein sequence
MTGSSVLLRF GVPALAAGLF GFTAWSVSAK YDPRPITEPV IAAPANSYAQ GVSAAGIIEP 
ASEVVAIATE RSGVVSRVEV VAGAGVTAGR PLFSVDDREV RAVVARHEGA LAAAEALLSS
ADLNIAMQRH KISQAAAELE NAQAESSRAE LDRLRYASLA RGSWVSRQRY EAAIADAGKA
AAAVAAAEAA VAAAKQQSKV LTAKRLEAEA NVAQSKAALE QARVDLDRTV VKAPIDGKIL
KVNVRVGEYA QAGALSSPLM IMGSADLLHV RADVDEADSW RINAGSPAVA RLRGNPKISA
PLSFVRIEPY VVPKRSLTGA STERVDTRVL QVIYALQVSD FPAFVGQQVD VFIKTDSPQG
VAELRRDPAE VARPLPACPQ SLATHRGCRI PGQADAPWQQ AQGTQIGQPA D