Gene M446_0092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_0092 
Symbol 
ID6130635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp103357 
End bp105540 
Gene Length2184 bp 
Protein Length727 aa 
Translation table11 
GC content72% 
IMG OID641640432 
ProductABC transporter related 
Protein accessionYP_001767111 
Protein GI170738456 
COG category[V] Defense mechanisms 
COG ID[COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.353929 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0328949 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG CCGCCCTGCG CCGCCTGCTG CCCTGGCCCG GCCGGGGCCG CCCGCCCGCC 
ACCCCGACCG TGCTCCAGAT GGAGGCGGTG GAGTGCGGGG CCGCGGCGCT CGCCATGGTG
CTCGCCCATC ACGGCGCCTT CGTGCCCCTG GAGCAGCTGC GGGTGGCCTG CGGGGTCTCC
CGCGACGGCA GCAAGGCCAG CAACATCGTC AAGGCGGCGC GGGGCTTCGG GCTCGCCGCC
AAGGGCTTCC GCAAGGAGCC GACGACCCTG CACGACCTGC CGATGCCGTG CATCATCCAC
TGGAACTTCA ACCACTTCGT GGTGCTGGAG GGGATCCGCG GGGAGCACGC CTTCATCAAC
GACCCGGCCA TGGGGCGCCG CCGCGTCACC ATGCAGGAAC TCGACCTCGC CTTCACGGGC
GTCGCCCTCG CCATGGAGCC GACCGAGGAG TTCCGCCGGA TCGGCCGCAA GCCGCAGGGC
TTCCGGCTGC TCCTGCGCGA ACTCGGCGCC TCCCGCGCGG CGGTCGGCCT GCTCGTCGCG
GTGAGCCTCG CGCTGATCGT CCCGGGCATC CTGATCCCGG GCTTCACCAA GATCTTCATC
GACGAGATCC TGATCCAGAA CACCCCGGGC TGGCTGACGC CGCTGCTGAT CGGGATGGGC
CTCACCGCCC TGTTCCGGGC CGGCGTCACC GCCCTGCAGC TGTCGCTGAT GACGCGGCTG
CAGACGAAGC TCGCCGTGGT GATGACCAGC CGCTTCCTCT GGCACGTCCT CGCGCTGCCG
ATGGAGTTCT TCGCCCAGCG CCACGCCGGC GACATCGCCA ACCGGGTCTC CACCAACGAG
CAGATCGCGC GCCTGCTCTC GGGCGGCCTC GTCAGCAACG CGCTCTCCCT GACCTCCCTG
GTCTTCTTCG CCGCCGCGAT GGCGGTCTAC GACCTGCTCC TGGCGGTGAT CGGCGTGGCG
CTGTCCCTGC TCAACGTGCT CGCCCTCCAC CTGATCGGGC GGCGCCGCGA GGATCTCAGC
CGCAGCCTCG CCATGGAGCG CGGCAAGCTC CTGGGCAGCA CGATCGGGGC GGTGCGCACC
ATCGAGACCC TCAAGGCGAG CGGGCTGGAG GACGAGGCCT TCGGGCACTG GGCCGGCATC
CAGGCCCGCG CCCTCAACGC CGAGCAGGAG CTCGGCGCCA CCTCGGCCTG GCTCGACACG
GTGCCGACCC TGCTCTCCGG CCTCACCACG GCGGCGATCC TGGGCATCGG CGGCCTGCGG
GTCACCGAGG GTTCGCTGAC CCTCGGCGGC CTCATCGCCT TCCAGTCGCT GATGGCGAGC
TTCTCCGAGC CGATCACGGC CCTGGTCGGC CAGATCGGCA GCATCCAGAT CATCAAGGGC
GGGCTGGAGC GCCTCGACGA CGTCTACAAC TACCCGGTCG AGCGGCCGGA GCCGGATCCC
GCCCTGCCGC CGCCGCCGCC GCGGCTCGTC GGGCGGGTCG AACTGGTCGG CGTGTCCTTC
GGCTACGCGA TCCTGGAGCC GCCCCTGCTG CAGGATGTCT CGATCACCAT CGAGCCGGGC
AGCCGCGTCG CCCTGGTCGG CCTCTCGGGG AGCGGCAAGT CGACCCTCGG GCGGCTGATC
TGCGGGCTCA ACCGGCCCTG GTCGGGGGAG GTGCGCCTCG ACGGGCGGCG CCTCGCCGAC
ATCCCGCCGG AGGTCTTCGC CCAGTCGGTC GCCTACGTCG ACCAGGACAT CGTCCTGTTC
GAGGGCAGCG TGCGGGACAA CCTCACCCTC TGGGACCCGA CCGTGCCCGA GCCCGACCTC
TCGCTGGCCC TCAAGGACGC GGCGGTCCAC GGCGAGGTCG CGACGCGGCC CGGCAATTAC
GACGGCCACG TGCTGGAGGG CGGCGCGAAT TTCAGCGGCG GCCAGCGCCA GCGCATCGAG
ATCGCCCGCG CCCTGGTGCA GAACCCCTCC GTCCTCGTCC TCGACGAGGC CACGGCCGCC
CTCGATCCGG TGACGGAGAA GATCATCGAC GACAACCTGA GGCGGCGCGG CTGCACCTGC
ATCATCATCG CGCACCGGCT CAGCACGATC CGCGACTGCG ACGAGATCAT CGTGCTGGAG
CGCGGGCGCA TCGCCGAGCG CGGCCGGCAC GAGGAACTCC TCGCCCGGGA GGGCGCCTAC
GCGGCGCTCC TGGCCCAGTC GTGA
 
Protein sequence
MSAAALRRLL PWPGRGRPPA TPTVLQMEAV ECGAAALAMV LAHHGAFVPL EQLRVACGVS 
RDGSKASNIV KAARGFGLAA KGFRKEPTTL HDLPMPCIIH WNFNHFVVLE GIRGEHAFIN
DPAMGRRRVT MQELDLAFTG VALAMEPTEE FRRIGRKPQG FRLLLRELGA SRAAVGLLVA
VSLALIVPGI LIPGFTKIFI DEILIQNTPG WLTPLLIGMG LTALFRAGVT ALQLSLMTRL
QTKLAVVMTS RFLWHVLALP MEFFAQRHAG DIANRVSTNE QIARLLSGGL VSNALSLTSL
VFFAAAMAVY DLLLAVIGVA LSLLNVLALH LIGRRREDLS RSLAMERGKL LGSTIGAVRT
IETLKASGLE DEAFGHWAGI QARALNAEQE LGATSAWLDT VPTLLSGLTT AAILGIGGLR
VTEGSLTLGG LIAFQSLMAS FSEPITALVG QIGSIQIIKG GLERLDDVYN YPVERPEPDP
ALPPPPPRLV GRVELVGVSF GYAILEPPLL QDVSITIEPG SRVALVGLSG SGKSTLGRLI
CGLNRPWSGE VRLDGRRLAD IPPEVFAQSV AYVDQDIVLF EGSVRDNLTL WDPTVPEPDL
SLALKDAAVH GEVATRPGNY DGHVLEGGAN FSGGQRQRIE IARALVQNPS VLVLDEATAA
LDPVTEKIID DNLRRRGCTC IIIAHRLSTI RDCDEIIVLE RGRIAERGRH EELLAREGAY
AALLAQS