Gene M446_0050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_0050 
Symbol 
ID6130412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp56918 
End bp58372 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content71% 
IMG OID641640393 
Productmajor facilitator transporter 
Protein accessionYP_001767072 
Protein GI170738417 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0174826 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGGCAG GGGCGACGAC GACACTGGCG GACGAGGCTG TCCGCACCGA CATCCCGGCC 
CGCATGGACC GGCTGCCCTG GAGCCGGTTC CACCTCCTCC TCGTGATCGC GCTCGGCATC
ACCTGGGTTC TCGACGGGCT CGAAGTCACC ATCGTGGGCG CGATCGGCCC GGTGCTGCAG
GATCCGCGCG CCCTGGGCCT CTCGGTGCAG GAGATCGGCG CCGCCGCCTC CTTCTACGTG
GTCGGGGCGG TGGCGGGGGC GCTCGTCTTC GGCTGGGTCA CCGACCGCTA CGGGCGCCGC
GTCGTCTTCT TCACCACCCT GGTCGTCTAC GTGGGCGGCG TGGTCGCGAG CGCGCTCGCC
TGGAACTTCT GGAGCTTCGC CCTCTTCCGG CTGGTCACGG GGCTGGGCAT CGGCGGCGAG
TACGCGGCCA TCAACTCGGC CATCGACGAA CTCATCCCGG CCAAGTACCG CGGCCGGGTC
GACCTCATCG TCAACGGCAG CTTCTGGGTC GGGGCCGCGG CGGGGGCGGC GGGCTCGCTC
CTCCTGCTCG ATCCGGACAT CGTGGCGCCG CATCTCGGCT GGCGCCTCGG CTTCGGCATC
GGCGGCGTGC TCGGCCTGTT CATCCTGGTC CTGCGCCGCT ACGTCCCCGA GAGCCCGCGC
TGGCTCGTGG TGCATGGCCG CCAGGAGGAA GCGGAGCGCA CCGTCGCGGA GATCGAGCGC
AAGGTCGAGG CCGAGACGGG CGCGCCCCTC GCCGAGCCCG ACGGCATCCT GGAAGTCCAC
CCCAAGGCGA GCTTCGGCTT CGGAGAGATC TTCGGCTCCA TGCTCGGGCC CCATCGCGGC
CGCAGCCTGC TCGCCCTGGT GCTGATGTCG GCGCAGGCCT TCCTGTTCAA CGCCGTGTTC
TTCACCTACG GCCTCGTGCT CGCGAAGTTC TACGGCATCC CGGAGACCGG GGCCGGGCTG
TTCCTGGTGC CCCTCGCCAT CGGCAACTTC CTCGGCCCGC TCCTCCTCGG CCACTACTTC
GACACGATCG GGCGCCGCCG CATGATCACC GGCACCTTCG CGGTGAGCGG CCTGATGCTC
GCCGTCACGG CATTGGTGTT CGGCCTCGAC CTGTTCACCG CCTGGACCCA GACCTTCGCC
TGGATCGCCA TCTTCTTCGT CGCCTCGGCG GCGGCGAGCT CCGCCTACCT CACGGCGAGC
GAGATCTTCC CGCTCGAGAC CCGGGCGCTC GCCATCGCGG TCTTCTACGC CCTCGGCACC
GCGGCCGGCG GCGTGATGGC GCCCTGGCTG TTCACCCGGC TGATCGAATC CGGCCACCAC
GCGGCCCTGG CCGCCGGCTA CGGCGGCGCC GCGCTCCTGC TCCTCGTCGC CGCGCTCACG
GAGTGGAAGC TCGGCGTCGA CGCCGAGGGC AAGTCTCTGG AGAGCATCGC GGCCCCCCTC
TCGAAGGCCC GGTGA
 
Protein sequence
MAAGATTTLA DEAVRTDIPA RMDRLPWSRF HLLLVIALGI TWVLDGLEVT IVGAIGPVLQ 
DPRALGLSVQ EIGAAASFYV VGAVAGALVF GWVTDRYGRR VVFFTTLVVY VGGVVASALA
WNFWSFALFR LVTGLGIGGE YAAINSAIDE LIPAKYRGRV DLIVNGSFWV GAAAGAAGSL
LLLDPDIVAP HLGWRLGFGI GGVLGLFILV LRRYVPESPR WLVVHGRQEE AERTVAEIER
KVEAETGAPL AEPDGILEVH PKASFGFGEI FGSMLGPHRG RSLLALVLMS AQAFLFNAVF
FTYGLVLAKF YGIPETGAGL FLVPLAIGNF LGPLLLGHYF DTIGRRRMIT GTFAVSGLML
AVTALVFGLD LFTAWTQTFA WIAIFFVASA AASSAYLTAS EIFPLETRAL AIAVFYALGT
AAGGVMAPWL FTRLIESGHH AALAAGYGGA ALLLLVAALT EWKLGVDAEG KSLESIAAPL
SKAR