| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_0042 |
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| Symbol | |
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| ID | 6135427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium sp. 4-46 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010511 |
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| Strand | - |
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| Start bp | 45341 |
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| End bp | 47500 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641640385 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001767064 |
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| Protein GI | 170738409 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.18474 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0082739 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTGGGACA ATCTGGGATC GTCCGAATCC GAATTCGCGG CTATCATTGC CGCCAGAATG
CATCGCGCGG TCAATGGCGA AGACGTCTTC TCCGTTGCGG CCGAGGTGAT TCATCAGCAG
ACGACAGCGA TTGATCTCGA CGGATACATG ATGTCGATGA GCGGCCGCTG CGCGCGCCGG
GTCTTCGGGA GCGGGGCGGC CTCGCGGCGG GGCGGCCTCG CCGAAGCCGG TCCTTGGCTC
GTGGCGGGGG GCGAGACCGG TCCGGTCCGG CAGCGGGCGG AGGAGGGCGG CACGATCCTG
CGGCAGCGCC TCGTCTCCGA CTCCCTCCTG CTCGGCGGGC TGGTCCTGGC CGGCCCCGAC
CTCGGCCCCG CCGACGAGCG CCGCTGCGCC GTCCTCGCCC GGCTGACGGC CGACGCCCTG
TCCGGGCTGC ACCAGCGGCG CCTCTCGCAG CTCGTGCTGG AGTCCCTGGA GCAGAGCGAG
GAGGCGGTCT CCTTCTACGA CGAGGAGGAG GGCATCGTCT TCACCAACGA TGCGTATCAC
CGCATCTTCC CGCATTATCC GGACCGCCGG GCCCTGCGCG GCGCGCACCA TCTCGACCTC
TACCGGCTCG ACCTCGACGC CGGCATCATC GACGATCCCC TGGCGCGGGC GGATCCCGAG
ACCTACCTCG CTGAGCGGGC GCGGAAATCG CGCCTGCTGA CCGATCGGCA GCGGGAGATC
CAGCGCGTCG GCGGCCGGAC CTACATCTAC ACGCGCACGC GTTCCAGGAC GGGCGCGACC
CTGTCGCGGC GCACCGACAT CACCGAGCAG GCCCTGACCG AGGCGCGCCT GCGCGAGCGC
GAAGCCGAGT TGCGCACCCT CGCCTTCCAG GATTCCCTCA CCGGCCTGTT CAATCGCGCC
TACCTGCGCG AGAAGGTCGA GCAGCTGGAA CGGGCGCTGG CCGAGGGGCG CGTCGCAGGC
CTCTGCGTCC TCATGATCGA CCTGAACGGC TTCAAGGCGG TGAACGACAC CTACGGCCAC
GATTGCGGCG ACAGGGTGCT CAGGATCGTC GGCGCGCGCC TGTCGGGCAT CCTGCCGCCC
GAGGCCGTGC TCATGCGGCT GGGCGGCGAC GAATTTCTCG TCCTGCTGGA GCAGGCCGCC
GAGGAACCCG AACTGGCGGC GATGGCCGAG GCGATCATCG CCGCCGTGAC CGAGCCGATC
CGTGACGGCG ACCTCGCGCT GAGCGTGGGG GCGAGCATCG GCATCGCCGC GGTGCGCGGC
CCGCAGACCG AGATCGACGC GATCATCGGC CGGGCCGACC TCGCGATGTA CGAGGCCAAG
TCGCTGCGCT GCAGCGGCTA CCGCTTCTTC CATTCCGGCC TGCGCGAGCA GCGGCTGGCG
CAGCTGGCCC TGATCGAGGA CGTGCGCGGG GCCCTGCGCC GCGGCGAGTT CGCGCTGCAC
TACCAGCCGC AATTCAGGAC GCAGGATGGC GGCCTCGCGG GCTTCGAGGC CCTGGCGCGC
TGGACCCATC CGCGACACGG GCCGATCCCG CCCTCGACCT TCATCCCGAT CATGGAGGAG
AACGGGCTCA TCGAGGCCCT GGGCACCTGG ATTCTGGATA CCGCCTGCGC CGAGGCGCGG
ACTTGGCCGA CGGACCTGCG GCTCGCCGTC AACGTCTCGC CCCTGCAGGT GCGCAGCGGG
CGCTTCTCCC TCACGCTCGC CGAGGCGCTT CTGCGCAGCG GCCTGCCGCC GCATCGGCTC
GAACTGGAGA TCACCGAATC GGTGCTGCTC GCCGACGAGG CGCGAAGCCG GGCCGAGCTC
GAGCGCTGGA AGGCGCTCGG CGCCCGCATC GCGCTGGACG ATTTCGGGCG CGGCTATTCC
GGGCTCGGCT ACCTGACCGC CTTCCCGATC GACAAGATCA AGATCGACCG CGCCTTCCTG
GCCGGGTTCG ACGCGCAGCG GCCGGACGCC GCCGCCGGCG TGATCCTCCA CGCGATCATC
CGCCTCGGCC GCGTCCTCGG CAAGACCGTG ACGGTCGAGG GTGTCGAGAG CCCCGACCAG
CTCGCCCATC TGCGCCGCGA GCGCTGCACC GAGGTGCAGG GCTTCCTGCT GGGCCGCCCG
ATGCCCGCCG CGGAGGTTCC CGGCTTCATC GCGCAGCGGG CAGCCCCGTC GGCGGCGTGA
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| Protein sequence | MWDNLGSSES EFAAIIAARM HRAVNGEDVF SVAAEVIHQQ TTAIDLDGYM MSMSGRCARR
VFGSGAASRR GGLAEAGPWL VAGGETGPVR QRAEEGGTIL RQRLVSDSLL LGGLVLAGPD
LGPADERRCA VLARLTADAL SGLHQRRLSQ LVLESLEQSE EAVSFYDEEE GIVFTNDAYH
RIFPHYPDRR ALRGAHHLDL YRLDLDAGII DDPLARADPE TYLAERARKS RLLTDRQREI
QRVGGRTYIY TRTRSRTGAT LSRRTDITEQ ALTEARLRER EAELRTLAFQ DSLTGLFNRA
YLREKVEQLE RALAEGRVAG LCVLMIDLNG FKAVNDTYGH DCGDRVLRIV GARLSGILPP
EAVLMRLGGD EFLVLLEQAA EEPELAAMAE AIIAAVTEPI RDGDLALSVG ASIGIAAVRG
PQTEIDAIIG RADLAMYEAK SLRCSGYRFF HSGLREQRLA QLALIEDVRG ALRRGEFALH
YQPQFRTQDG GLAGFEALAR WTHPRHGPIP PSTFIPIMEE NGLIEALGTW ILDTACAEAR
TWPTDLRLAV NVSPLQVRSG RFSLTLAEAL LRSGLPPHRL ELEITESVLL ADEARSRAEL
ERWKALGARI ALDDFGRGYS GLGYLTAFPI DKIKIDRAFL AGFDAQRPDA AAGVILHAII
RLGRVLGKTV TVEGVESPDQ LAHLRRERCT EVQGFLLGRP MPAAEVPGFI AQRAAPSAA
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