Gene M446_0041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_0041 
Symbol 
ID6135426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp44126 
End bp45322 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content74% 
IMG OID641640384 
Productlytic murein transglycosylase 
Protein accessionYP_001767063 
Protein GI170738408 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2951] Membrane-bound lytic murein transglycosylase B 
TIGRFAM ID[TIGR02283] lytic murein transglycosylase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.765237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00609082 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGCTTC GCCTGCGCCT GACGGCCGCG ACCCTGCTGT GCCTGGGCGG CTTCGCGCTG 
CCCGGCGCGG CGCGGGCCGA TTTCCGCTCC TGCCTCGCCG GCCTCGGCCA GGAGGCGGGG
GGCAGGGGCA TCTCGCCGGC CGCCTTCCAG GCCGCCACCG CCGGCATCGT CTACGACGAC
AAGGTCATCG AACTCTCCCA GGCCCAGCCA GAGTTCAAGA CGCCGATCTG GGACTACATG
GCGGCCCTCG TGGACGACGA GCGCGTCGAG GACGGCCGCG CCGCCATGCG CCAGCACGCC
GCCGCCCTGG CCGAGGCCGA GGCGCGCTTC CACGTGGACC GCTACACGAT CGCGGCGGTC
TGGGGCGTCG AGTCCAATTT CGGCAAGAAC CTCGGCAAGA TGCCGCTGAT CCAGTCGCTC
GCGACCCTGG CCTGCAGCCC GAACCGGCGC GCCGGCTACT TCCGCGGCGA GCTGATGGCG
ACCCTGAAGA TCATCGACCG CGGCGACATC GCGCCGGACC GGCTGACCGG CTCCTGGGCC
GGGGCTTTCG GGCAGACGCA GTTCATGCCC TCGACCTACC AGCGCCTCGC CGTCGACCTC
GACGGGGACG GGCGGCGCGA CGTGGTCGAT TCGGTGGCGG ACGCGGTCGG CTCGACGGCC
AATTTCCTGC GCGCCGCCAA GTGGCAGAAC GGCCTGCCCT GGGGCTACGA GGTGCGGCTG
CCGCGGGGCT TCAGCGTCGC CGCCGCCGGG CGCAAGAACA AGCGGCCGAT CGCGCACTGG
GCGAGCCTCG GGGTCGCCCG GGTCGACGGG CGCCCGCTCT CCGGCGAGGG TCCGGCCGGC
ATCATCGCCC CGGCCGGGGT CGACGGCCCG GCCTTCCTGG TGACCCGGAA CTTCGACGCG
ATCTACTCCT ACAACGCGGC CGAATCCTAC GGTCTCGCCA TCGCGGTGCT GTCCGACCGG
CTGCGCGGCC GGGCCGGCAT CCAGACCGCG TGGCCGACCG ACGACCCGCC CCTGTCGCGG
GCGGAGCGCC GGACCCTGCA GAGCGCCCTC GCCTCGCGCG GCTACGACGT CGGCGAGCCG
GACGGCCGGG TCGGCGCCAA GACCCGCGAC GCGATCAAGG ACATCGAGCG TCAGCTCGGC
TGGCCGCAGA CCGGCCGTCC CGGCGCGAAG GTGCTGGAGG CGCTCCGCCG CGGCTGA
 
Protein sequence
MTLRLRLTAA TLLCLGGFAL PGAARADFRS CLAGLGQEAG GRGISPAAFQ AATAGIVYDD 
KVIELSQAQP EFKTPIWDYM AALVDDERVE DGRAAMRQHA AALAEAEARF HVDRYTIAAV
WGVESNFGKN LGKMPLIQSL ATLACSPNRR AGYFRGELMA TLKIIDRGDI APDRLTGSWA
GAFGQTQFMP STYQRLAVDL DGDGRRDVVD SVADAVGSTA NFLRAAKWQN GLPWGYEVRL
PRGFSVAAAG RKNKRPIAHW ASLGVARVDG RPLSGEGPAG IIAPAGVDGP AFLVTRNFDA
IYSYNAAESY GLAIAVLSDR LRGRAGIQTA WPTDDPPLSR AERRTLQSAL ASRGYDVGEP
DGRVGAKTRD AIKDIERQLG WPQTGRPGAK VLEALRRG