Gene M446_0034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_0034 
Symbol 
ID6135376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp35525 
End bp36481 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content79% 
IMG OID641640377 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001767056 
Protein GI170738401 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0533139 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCTG CCCCGCTCAT CGCGCTCACG GGCGCCACCG GCTTCATCGG CCGCCACCTC 
CTGCGCGACC TCACCGGCCG CGGCTACAGG GTCCGGGTGC TGCTGCGCCG GCCGGTCGCG
CTGCCGCCCG GGGCGAGCGG GGCCGTGGTC GGGGACCTCG CCCGGCCGCA GAACATGGCG
GCGGCGCTCG CGGGCGTCGA CGCGGTGGTG CACTCGGCCG GCCTCGCCCA CGCCATGTCG
GGGGCGCCGG AGGACGATTA CCGGACCTTC AACACCGAGG CGACGCGCGG CCTCGCCCAG
GCCGCCGCCA AGGCGCGGGT GCGCCGCTTC GTGTTCCTGT CCTCGATCCG GGCGCAGTGC
GGCCCCTCGG CGCCCGGGAT CCTCACCGAG GCGGATGCGG CGGCCCCCAC CGACGCCTAC
GGCCGCTCCA AGCTCGCCGC CGAGGAGGCC CTCGCCGCGG TCGAGATCGA CTTCGCGGCC
CTGCGCCCGG TCCTGGTCTA CGGACCCGGG GTGAAGGGGA ACATGGCCGC GCTCCTCGCC
CTGGCGGCGC GGCCCGTCCC GCTGCCCCTC GGCGGCCTGC GCGGACGCCG CTCCCTGGTC
TCGGTCGAGA CGCTCGCGGA CGCGGTCGAG GCGGTGCTGC GCGCCCCCGG TTCCCTGCGG
CGGCCGCTCA TCGTGGCCGA GCCGGACCCG CTCACCGTGC CGGAGATGCT GGCCGCGCTC
AGGGCCGGGT TCGGCCGCCC GCCCGGGCTC ATGCCGGTGC CGGCGCCGCT CGTCGCGGCG
GCCCTGCGGC TCGCGGGCCG CGGCGAACTC GGCGAACGCC TCGCGGGCTC GCTCGTCGCC
CGGGCGGAGG CGCTCGCCGG CCTCGGCTGG ACGGCGCCGC GCGGCAGCCG GGAGGGCCTC
ACCGCGCTCG CCCGCGCGGT CGCGGGCGGG GAGGCGGCTC ACACCACATC CGGTTGA
 
Protein sequence
MTAAPLIALT GATGFIGRHL LRDLTGRGYR VRVLLRRPVA LPPGASGAVV GDLARPQNMA 
AALAGVDAVV HSAGLAHAMS GAPEDDYRTF NTEATRGLAQ AAAKARVRRF VFLSSIRAQC
GPSAPGILTE ADAAAPTDAY GRSKLAAEEA LAAVEIDFAA LRPVLVYGPG VKGNMAALLA
LAARPVPLPL GGLRGRRSLV SVETLADAVE AVLRAPGSLR RPLIVAEPDP LTVPEMLAAL
RAGFGRPPGL MPVPAPLVAA ALRLAGRGEL GERLAGSLVA RAEALAGLGW TAPRGSREGL
TALARAVAGG EAAHTTSG