Gene M446_0031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_0031 
Symbol 
ID6135373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp31719 
End bp33920 
Gene Length2202 bp 
Protein Length733 aa 
Translation table11 
GC content69% 
IMG OID641640374 
Product(p)ppGpp synthetase I, SpoT/RelA 
Protein accessionYP_001767053 
Protein GI170738398 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID[TIGR00691] (p)ppGpp synthetase, RelA/SpoT family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.514737 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0391032 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGCC AGTACGAACT CGTCGAGCGG GTGAAGGCCT ACAACCCCGC CGCCGACGAG 
GCGATGCTCA ACCGGGCCTA CGTTTACGCG ATGCGGGCGC ACGGCTCGCA GATGCGCGCC
TCGGGCGACC TGTTCTTCGC CCACCCGCTC GAAGTGGCGG CGATCCTGAC GGACCTGCGG
GTCGACGACG CCACCATCGT GGCCGCCGTG CTGCACGACA CGGTGGAGGA CACGGCCGCC
ACCCTGGAGG AGATCAACCG CACCTTCTCG CCCGAGATCG GCACGCTCGT CGACGGCCTG
ACCAAGATCA AGCGCCTCGA CCTCGTCTCC AAGCAGGCGG CCCAGGGCGA GAACTTCCGC
AAGCTGCTGC TCGCCATCGC GGCGGACGTG CGCGTGCTGC TCGTCAAGCT GGCCGACCGG
CTGCACAACA TGCGCACCCT GCAGCACATG CCGCCGGAGA AGCGCGTCCG CATCGCCCAG
GAGACGCTCG ACATCTACGC GCCGCTGGCG AGCCGGATGG GCATGCAGGA GCTGCGCGAG
GAGCTGGAGG ACCTCTCCTT CCGCAACCTC AAGCCGGATG TCTACGCCAC GATCAGCCGC
CGGCTCGACG ACCTGACCGC CAAGTCCGAG CGCCTCGTCG AGAGCATCGA GCGCGATCTC
GTCCAGAGGC TCGCCGCCAA GGGCATCGTC GCCAAGGTCA AGGGCCGGCA GAAGCGCCCC
TACTCCATCT GGAGCAAGAT GGAGCGCAAG TCAGTCGCCT TCGAGCAATT GTCCGACATC
TTCGGCTTCC GGGTCATCGT CGATTCGGTC GATACCTGCT ACCGGGCGCT CGGGGTCGTG
CACACGACCT GGCCGATGGT GCCGGGCCGC TACAAGGACT ACATCTCGAC CCCGAAGCAG
AACGATTACC GCTCGATCCA CACCACGGTG ATCGGGCCGA AGAGCCAGCG CGTCGAGCTG
CAGATCCGCA CCGCCGAGAT GGAGGAGGTG GCGGAGTACG GCATCGCCGC GCACGCGCTC
TACAAGGACG GCTCGCCCCA CCTCGCCACC GAGAGCGGCG CCTACCAGTG GCTGCGCCGC
ACCATCGAGC TCCTCGCCGA GGGCGACAGC CCGGAGGAGT TCCTGGAGCA CACCAAGCTC
GAGCTCTTCC AGGACCAGGT CTTCTGCTTC ACCCCGAAGG GCCGGCTGAT CGCGCTGCCG
CGCGGGGCGA CCCCGATCGA CTTCGCCTAC GCGGTCCACA CCGAGCTCGG CAACGCCGCG
GTCGGCGCCA AGATCAACGG CCGCATCGCT CCGCTCCTCA CCGAGTTGCA GAACGGCGAC
GAGGTCGAGA TCGTGCGGGC GGACGGCCAG ACCCCGCCGG CGGCCTGGGA ATCCCTCGTC
GTGACCGGCA AGGCCCGGGC GGCGATCCGG CGGGCGACGC GCTCGGCGGT GCGGCGGCAA
TATGCCGGGC TCGGGCGGCA GATCCTCGAC CGCGCCTTCG AGCGGGCGGG CAAGAATTTC
TCCGACGAGA AGCTGCGCGG CGCCCTCCCC CGCCTCGCCC GCACCTCCGC CGAGGACGTC
TTCGCGGCGG TGGGACGCGG CGAGATGTTC TCGGGCGACG TCGTGAAGGC GGTCTATCCC
GACTACAAGG ACGAGCGCCG CAGCCAGCCC GCCCCGAGCG CGCCGAGGCC CCACGTCAAC
GGCGCCGGCC GCCTCTCCCT CGACAAGGAC CAGACCGTGC GCCTGACCTG GCCCGGCAAG
GGCGGCGAGG ACGCGATCCC GATCCGCGGC CTCGACCGCG ACCTGCCGGT GCGCTTCGCG
CCCGAGGGCG GCGCGGTGCC GGGCGACCGC ATCGTCGGCA TCCTCACCGC CGGCGAGGGG
GTGACGATCT ACCCGATCCA GTCCCCGGCG CTCGCCGATT TCGACAACGA GCCGGACCGC
TGGCTCGACG TGCGCTGGGA CGTGGACGGC GGCACCCACC AGCGCTTCCC GGCCCGCATC
GCCCTCCAGT CGATCAACGA GCCCGGCAGC TTCGCGCAGA TCGCCCAGGT CATCGCCGAC
CACGACGGCA ACATCGACAA CATCTCGATG AAGCGGCGCA GCCAGGACTT CACTGACGTG
CTGATCGACC TCTCGGTCTG GGACCTCAAG CACCTCAACG CGATCATCTC CGAGCTGAGG
GCCAAGCGCG TGGTCAGCAA GGTCGAGCGG GTCAACGGCT GA
 
Protein sequence
MMRQYELVER VKAYNPAADE AMLNRAYVYA MRAHGSQMRA SGDLFFAHPL EVAAILTDLR 
VDDATIVAAV LHDTVEDTAA TLEEINRTFS PEIGTLVDGL TKIKRLDLVS KQAAQGENFR
KLLLAIAADV RVLLVKLADR LHNMRTLQHM PPEKRVRIAQ ETLDIYAPLA SRMGMQELRE
ELEDLSFRNL KPDVYATISR RLDDLTAKSE RLVESIERDL VQRLAAKGIV AKVKGRQKRP
YSIWSKMERK SVAFEQLSDI FGFRVIVDSV DTCYRALGVV HTTWPMVPGR YKDYISTPKQ
NDYRSIHTTV IGPKSQRVEL QIRTAEMEEV AEYGIAAHAL YKDGSPHLAT ESGAYQWLRR
TIELLAEGDS PEEFLEHTKL ELFQDQVFCF TPKGRLIALP RGATPIDFAY AVHTELGNAA
VGAKINGRIA PLLTELQNGD EVEIVRADGQ TPPAAWESLV VTGKARAAIR RATRSAVRRQ
YAGLGRQILD RAFERAGKNF SDEKLRGALP RLARTSAEDV FAAVGRGEMF SGDVVKAVYP
DYKDERRSQP APSAPRPHVN GAGRLSLDKD QTVRLTWPGK GGEDAIPIRG LDRDLPVRFA
PEGGAVPGDR IVGILTAGEG VTIYPIQSPA LADFDNEPDR WLDVRWDVDG GTHQRFPARI
ALQSINEPGS FAQIAQVIAD HDGNIDNISM KRRSQDFTDV LIDLSVWDLK HLNAIISELR
AKRVVSKVER VNG