Gene M446_0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_0018 
Symbol 
ID6128931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand- 
Start bp21891 
End bp22832 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content75% 
IMG OID641640361 
Productsubstrate-binding region of ABC-type glycine betaine transport system 
Protein accessionYP_001767040 
Protein GI170738385 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.74705 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0751929 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGC CCGCGAAATC GTCCGCCGCG CGGCCGCGCC CGGGCCCGAA CCGCCGCCTC 
CTCCTGCTCG GGCTCGGCGG CGCCCTCGCG GGCGGCCGGG CCTCCGCCGA CGGGGAGGCC 
GTGACGGTCG CCTCGAAGGG CGATGCCGAG GGGACGCTGC TCGGCCAGAT CATCGCCCAG 
ACCCTGCGCG GCCTCGGGAT CCCGGTGGTG GCGCGCCTGC AGCTCGGCCC GACCCGGATC 
GTCCGGACGG CGATCACGGC CGGCGAGATC GACGCCTATC CGGAATATAC CGGCAACGCC 
GCCTTCTTCT CGGGCACCGA GACCGATCCG GCCTGGAAAT CGGCCGCGAC CGCGATCGCG 
GCAGCGCGAC GCTTCGACGC CCCGCACGGC CTCGTCTGGC TCACCCCGGC GCGGGCGAAC 
AATTCGTGGC AGATCGCCGT GCGGGGCGAC CTCGCCCGCC GCGAGCGGCT GTCCGGCATG 
GCGGATTTCG CCGGGGCGGT GCGGCGCGGG CTGATCGAGC TCGCGGCCTC CGCCGAGTTC 
GTCGAGAGCC CGGCGGCGCT CGCCGCCTAC GAGAAGGCCT ACGGCTTCGT CCTGCCGCGC 
GAGCGCATCA TCACCCTGCC GGGCGGCGAC ACCTCCGTCA CCCTGCGGGC CGCCGCCCAG 
GGCATCAGCG GCGTGAATGC CGGCATGGTC TACGGCACCG ATGGGGCGAT CGCCGCCCTC 
GACGTGGTGG TCATGGAGGA TCCCCTGGGC GCCCAGATCG TCTACGAGCC GGCGCCGGTC 
TTCCGCGCCC CGGTGCTCGC CCGCCACCCG GCGATCGCCC CGGCCCTCGA CGGGATCTTC 
TCCCGGCTCG ACCTGCCGAC CCTGCGGCGG CTCAACGGGG CGATCACCGT CGAGGGCGGG 
ACGCCGGAGG CGGTGGCCCG CCGCTATCTG GCGGAGGGCT GA
 
Protein sequence
MKTPAKSSAA RPRPGPNRRL LLLGLGGALA GGRASADGEA VTVASKGDAE GTLLGQIIAQ 
TLRGLGIPVV ARLQLGPTRI VRTAITAGEI DAYPEYTGNA AFFSGTETDP AWKSAATAIA 
AARRFDAPHG LVWLTPARAN NSWQIAVRGD LARRERLSGM ADFAGAVRRG LIELAASAEF 
VESPAALAAY EKAYGFVLPR ERIITLPGGD TSVTLRAAAQ GISGVNAGMV YGTDGAIAAL 
DVVVMEDPLG AQIVYEPAPV FRAPVLARHP AIAPALDGIF SRLDLPTLRR LNGAITVEGG 
TPEAVARRYL AEG