Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_6242 |
Symbol | |
ID | 6142381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010510 |
Strand | + |
Start bp | 521168 |
End bp | 523147 |
Gene Length | 1980 bp |
Protein Length | 659 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641640285 |
Product | hypothetical protein |
Protein accession | YP_001766968 |
Protein GI | 170745511 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.253941 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.568466 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTGTCG ACGACGCCCT GCCACGCCAA CCCGCCCAGG TCCCGCCGCC GCTCGTCCCG GGCCTGCGCG GGCTGCTGAC TCTCGCGGTC GGCGTCGTGC TCGTCGCGGC GCTCTACTTC GGGCGCGAGG TTTTCATCCC CCTCGTCCTG GCCGTGCTGC TCAGCTTCGT CCTCGGGCCG GTCGTCAACC TGCTGCGGAA GGCCAAGCTC GGGCGCGTAC CCTCGGTCAT CGTCGCGGTC CTGCTGGCCC TCGGCGTTCT CGGCGGCATC GCCGCCGTCA TCGGCACCCA GGTCGCCGGG CTCGCCGGTA ACCTGCCGCA ATATCAAGCC ACCGTGCAGA GGAAGGTCGC GGGCCTGCAG CAGGGCTGGC TGGGCGAGGC CAACCGCATC CTCCAAAAAT TCAACCACCA AGTGCACGAC GTGACCCAGA AGGCGGACGC AGCCGGCACG ACCGCCGCGA CCGGACCGGC GGGCGAGACG CCCAAGGCGC AACTGGTGCG CGTGGAGCAG CCCGAGCCCT CGCCCTTCGC GCTGGCCGAG AAGGTCCTGG GACCCATCGT CTCACCGCTG ACCGACGTCG GTATCGTCCT CGTCGTGGTC GTGTTTCTCC TCCTGCAGCG CGAGGACCTG CGCAATCGCA TGATCCGCCT GTTCGGATCG AGCGACCTGC ACCGCACGAC GGTGGCCATG GACGACGCGG CCGGCCGCCT CGGCACCTAC TTCCTCGCTC AGCTCGGCAT GAACGCGACG TTCGGGGTGA TCGTCGGGAT CGGCCTCTGG TTCATCGGCG TGCCCAACCC GCTCCTGTGG GGCGTGTTCT CGGCGATCAT GCGCTTCATC CCCTATATCG GTGCCATCGC CTCCGGCATC CTGCCCGTGG CCTTGGCGGC CGCGGTCGAC CCGGGCTGGT CGATGGTCAT CGCGACCGCG GCGCTCTTCC TCGTCGCCGA GCCGCTCTTC GGGCAGGTGA TCGAGCCTCT GCTCTACGGC CACTCCACCG GGCTCTCGCC CTTCGCGGTG ATCGTCTCAA CCCTGTTCTG GGGCTTCCTG TGGGGACCCA TCGGCCTGAT CCTGGCAACC CCGTTCACCG TCTGCCTCGT CGTGCTCGGC CGCCACGTGG ACAGCCTGGA GTTCTTCGAC GTGCTGCTGG GCGACCGGCC ACCACTGACG CCGGTGGAGA ACTTCTACCA GCGCATGCTG GCCGGCGACC CGGACGAGGT GCGCGAGGTC GCCGAGGCCA TGCTGAAGGA CCGCTCGCTC TCCTCGTATT ACGACGAAGT GGCGCTCAAG GGCCTGCAAC TCGCCGCCAA CGACTTCGCG CGCGGGGTGG TGACGCCGGC GCAACTCGAC AACATCCGCG CTTCGGCCCG CTCGCTGGTG GAGGACTTCG AGGACCATCC CGACGCGCCA CCCGCGGGCG ACGACAAGAG GGTGAACCCG AGCGAGACCC CGACCCTGGC CGAGCGGACC CACACCCGTA CCGAGGCCGT GCCGGGACAG GCACCGCCGC GGGAGACTCT GCCTGAGGCG TGGCGCGGGG AGGCACCAGT CCTGTGCGTG GCCGGGCGCG GCCCCCACGA CGAGGCCTCC TCGGCGATGC TGGCCCAGCT GCTGCGCAAG CACGGGCTCG GTGCGCGCGT GACGCCCTAC CGGGCGGTCT CGCGCGAGGG CATCCGCGAC CTCGACGTGA CCGGCGTCGC CATGGTGTGC ATCTCCTACC TCGACATCAC CGGGAACCCG GCGCATCTGC GCTATCTCCT GGAGCGGGTG AGGCGCCGGG CGCCGGGCGT CCCGGTCCTG GTGGGCCTCT GGCCGGTCGG CGAGCGGGTG CTCACCGACG CCGCGCTCGG TCGGGAGGTC GGAGCGGACG TCTACGTGTC CTCGCTCCGT GACGCGGTCG AGGCATGCCT CAGGGCGGCC GAAGGCGCGA CCCGCGGCCC GGGCGTCGGG GATCGAGAGG CCTTCGCCAT GATCCGATGA
|
Protein sequence | MPVDDALPRQ PAQVPPPLVP GLRGLLTLAV GVVLVAALYF GREVFIPLVL AVLLSFVLGP VVNLLRKAKL GRVPSVIVAV LLALGVLGGI AAVIGTQVAG LAGNLPQYQA TVQRKVAGLQ QGWLGEANRI LQKFNHQVHD VTQKADAAGT TAATGPAGET PKAQLVRVEQ PEPSPFALAE KVLGPIVSPL TDVGIVLVVV VFLLLQREDL RNRMIRLFGS SDLHRTTVAM DDAAGRLGTY FLAQLGMNAT FGVIVGIGLW FIGVPNPLLW GVFSAIMRFI PYIGAIASGI LPVALAAAVD PGWSMVIATA ALFLVAEPLF GQVIEPLLYG HSTGLSPFAV IVSTLFWGFL WGPIGLILAT PFTVCLVVLG RHVDSLEFFD VLLGDRPPLT PVENFYQRML AGDPDEVREV AEAMLKDRSL SSYYDEVALK GLQLAANDFA RGVVTPAQLD NIRASARSLV EDFEDHPDAP PAGDDKRVNP SETPTLAERT HTRTEAVPGQ APPRETLPEA WRGEAPVLCV AGRGPHDEAS SAMLAQLLRK HGLGARVTPY RAVSREGIRD LDVTGVAMVC ISYLDITGNP AHLRYLLERV RRRAPGVPVL VGLWPVGERV LTDAALGREV GADVYVSSLR DAVEACLRAA EGATRGPGVG DREAFAMIR
|
| |