Gene Mrad2831_6088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_6088 
Symbol 
ID6142233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010510 
Strand
Start bp346474 
End bp347019 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content68% 
IMG OID641640137 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001766820 
Protein GI170745363 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.13008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCGG CTTCCGATAC CCAGAGCGAG CGAAATGCGC GGTTCGGTCT GCTCTATCGC 
TCCTACCAAA CTGCGCTGCT GCGCTTCCTC ACCAACCGAG TTGGCCGAGA GGACGCACCT
GACCTGGTTC AGGAAACCTT CGTACGTATG GTTCAGAGCG GTACGGACCC CGGCGTCATT
CGGAACGACA GGGCATTTCT CTTCCATGTC GCAGGCAATG TGGTCGCCGA CCATGGCCGA
GCAACCCGCC GCCGCAACCG GCTCCTCACG CCCGACGAGG TGGATGCCCT TCTATCCGTG
CCCGACGAGT CTGCGCGGCC CGATCGGGCC GCGCAGGCGC GTATCGAGGG GCAGCACCTG
GCCCGCGCGC TCGCCGAGAT GCCGCCGCGA CGCGCCGAGG CGTTTCGGCT GAGTCGGCTG
AATGGCCTGA GCCATCAGGC CATCGCGAGC CGTCTCGGCG TGTCGGTCCG GACGGTGGAG
GGGGAGATCC GGATGGCCCT CGATCACTGC GCCGAGCGGC TCGGCCGGCG GCCCCCGAAC
CCGTGA
 
Protein sequence
MAAASDTQSE RNARFGLLYR SYQTALLRFL TNRVGREDAP DLVQETFVRM VQSGTDPGVI 
RNDRAFLFHV AGNVVADHGR ATRRRNRLLT PDEVDALLSV PDESARPDRA AQARIEGQHL
ARALAEMPPR RAEAFRLSRL NGLSHQAIAS RLGVSVRTVE GEIRMALDHC AERLGRRPPN
P