Gene Mrad2831_6075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_6075 
Symbol 
ID6142220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010510 
Strand
Start bp330360 
End bp331319 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content69% 
IMG OID641640124 
Productnickel transporter permease NikB 
Protein accessionYP_001766807 
Protein GI170745350 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID[TIGR02789] nickel ABC transporter, permease subunit NikB 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA CGCCGATGCT CCGCTTCATC GCCGCCCGCC TCGCACTGAT CCCGCCGATG 
CTACTCGGCG TGTCGATCCT CGTGTTCGTG ATGCTGCGGC TTGGCCAGGG CGACCCGGCC
CTCGACTACC TGCGCCTGTC GCAGATACCT CCCACCGACG CCGCCCTCGC CGACGCACGT
ATCCTGCTCG GCCTCGACCG ACCATTCGTC GTCCAATACC TCGATTGGCT TTGGCGCGCC
CTGCAAGGGG ATTTCGGCCT CTCCTACGTC ACGCGCCGGC CGGTCCTGCC TGAGCTCCTC
GGCTACCTGC CCGCGACCCT CGAACTCGCC GGGACCGCGC TCGCCGTCAC CATTGCCGTC
AGCCTGCCGC TGGGCGCCTG GGCGGCCGCC CATCGCGGCG GCTGGCAGGA TCGCCTCGTG
CGTGGGATCG CCGTGCTCGG CGTCTCGCTG CCGAACTTCT GGATCGCCTT CCTGCTCGTC
GCGCTCTTCT CGGTCACCCT GGGATGGCTG CCGCCGATGG GGCGAGGCAC ACTCGCGCAT
CTCGTCATGC CGGCGCTGGC GATCTGCCTG ATGTCGCTCT CGGTCAACGC TCGCCTCCTG
CGGGCGAGCA TGCTGGAGGT CGCGGGCACG CGCCACGTCC TCTACGCACG TCTGCGCGGG
CTCCCCGAGC GAACCGTGCA ACGCCGACAC GTGTTCCGGA ACGCCCTGGT TCCGGTCGTG
ACCGCCACCG GCATGCATGT CGGCGAACTC CTGGGCGGCG CGCTCGTGGT CGAGACGATC
TTCTCGTGGC CGGGCGTCGG CCGCTACGCG GTCTCGGCGA TCTACAACCG CGACTACCCG
GTCATCCAGT GCTTCACCCT GGTCATGACC GCGGTGTTCG TCCTCTGCAA CCTCGCGGTC
GACATCGCCT ATGCCTGGCT CGATCCGCGC ATGCGTCTGG GTGGGGAGGC GGTGGCGTGA
 
Protein sequence
MTATPMLRFI AARLALIPPM LLGVSILVFV MLRLGQGDPA LDYLRLSQIP PTDAALADAR 
ILLGLDRPFV VQYLDWLWRA LQGDFGLSYV TRRPVLPELL GYLPATLELA GTALAVTIAV
SLPLGAWAAA HRGGWQDRLV RGIAVLGVSL PNFWIAFLLV ALFSVTLGWL PPMGRGTLAH
LVMPALAICL MSLSVNARLL RASMLEVAGT RHVLYARLRG LPERTVQRRH VFRNALVPVV
TATGMHVGEL LGGALVVETI FSWPGVGRYA VSAIYNRDYP VIQCFTLVMT AVFVLCNLAV
DIAYAWLDPR MRLGGEAVA