Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_5949 |
Symbol | |
ID | 6142119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010510 |
Strand | + |
Start bp | 196922 |
End bp | 198340 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641640007 |
Product | D-lactate dehydrogenase (cytochrome) |
Protein accession | YP_001766690 |
Protein GI | 170745233 |
COG category | [C] Energy production and conversion |
COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00822967 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAACGCAC CCGCTCCCGC CCCCCGCACC CGCCCGGACG CGGCGACGAT CGCGGGTCTC ACCGAGGCCT TGCGGGCCGT GCTCGGGGAC CGGGTGACGG AGAGCCGGGC CGTGCGCGAG CAGCACGCCA ACCAGCTCAC CTGGGCGCCG TGCGAGCCGC CGGACCTCGT GGTCTTCCCG CACACCACCG CGGAGGTGCA GGCCGTCGTG CGCGCCTGCG CCGAGCGCGA CGTGCCGATC GTGCCCTACG GCGTCGGCAC CTCCCTCGAG GGCCACGTCA ACGCGCCGTT CGGCGGCGTC TCGATCGACA CGGGCGCGAT GAATCGCGTC CGCGCGGTCA ATGCCGACGA CCTCGACTGC ACGGTCGAGG CCGGCGTCAC CCGCAGGGCG CTGAACGCGT ACCTGCGCGA TACCGGCCTG TTCTTCCCCA TCGATCCCGG GGCGGACGCC ACGATCGGCG GGATGGCGGC GACGCGGGCA TCGGGCACCA ACGCCGTGCG CTACGGGACG ATGAAGGATG CGGTGCTCGC GCTCACCGCG GTGATGCCGA ACGGCGACAT CGTCACGACC GCCCGGAGGG CGCGCAAGTC GTCCGCCGGC TACGATCTCA CCCGGCTCCT CGTCGGCTCG GAGGGCACGC TCGGGATCAT CACCGAGGTC ACGCTGCGCC TGCACGGCAT CCCCGAGGCG ATCTCGGCGG GCATCTGCCC GTTCCCCTCG ATCAAGGCGG CCTGCGACGC CACGATCCTG ACGATCCAAT CCGGCATCCC GGTCGCGCGC ATCGAGCTGC TCGACGAGGT GCAGGTCGCG GCCTGCAACC GCTACTCGAA GCTGACCCTG CCGGAGACCC CGCTGCTCCT GGTCGAGTTC CACGGCACGG ACGCGGGCGC GCGGGAGCAG GCCGAGCGGT TCGGCGAGAT CGCCGCCGAG CTCGGCGGCG GCCCGTTCGA CTGGGCGACC GGGGCCGACG CGCGCGCACG CCTCTGGCAG GCGCGCCACG ACGTCTACTG GGCCGCGGTC GCGCTGCGGC CCGGTCCCAC GATCAAGAAC ATGTCGACCG ATGTCTGCGT GCCGATCTCG CGGCTCGCGG AATGCGTGGA GGCGACGAAG CGCGACATCG CCGCGACCGG GCTCACGGCG CCGATCGCCG GCCATGTCGG CGACGGCAAC TTCCACACCC TCCCGCTCGT CGATGCCGAC AGCCCCGAGG AGATGTCCGC GGTGGCCGGC TTTCTCGACC GGCTCGTCGC CCGCGCGCTG GACCTGGGCG GCACCTGCAC GGGCGAGCAC GGGATCGGCC AGAAGAAGAT GCGCTTCATG GAGAGCGAGC ACGGGCCGGA GGCGCTCGGC CTCATGCGGA CCCTCAAGCG CGCCATCGAT CCCCGGAACC TCATGAACCC CGGCAAGCTG ATCCCCTGA
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Protein sequence | MNAPAPAPRT RPDAATIAGL TEALRAVLGD RVTESRAVRE QHANQLTWAP CEPPDLVVFP HTTAEVQAVV RACAERDVPI VPYGVGTSLE GHVNAPFGGV SIDTGAMNRV RAVNADDLDC TVEAGVTRRA LNAYLRDTGL FFPIDPGADA TIGGMAATRA SGTNAVRYGT MKDAVLALTA VMPNGDIVTT ARRARKSSAG YDLTRLLVGS EGTLGIITEV TLRLHGIPEA ISAGICPFPS IKAACDATIL TIQSGIPVAR IELLDEVQVA ACNRYSKLTL PETPLLLVEF HGTDAGAREQ AERFGEIAAE LGGGPFDWAT GADARARLWQ ARHDVYWAAV ALRPGPTIKN MSTDVCVPIS RLAECVEATK RDIAATGLTA PIAGHVGDGN FHTLPLVDAD SPEEMSAVAG FLDRLVARAL DLGGTCTGEH GIGQKKMRFM ESEHGPEALG LMRTLKRAID PRNLMNPGKL IP
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