Gene Mrad2831_5949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_5949 
Symbol 
ID6142119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010510 
Strand
Start bp196922 
End bp198340 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content72% 
IMG OID641640007 
ProductD-lactate dehydrogenase (cytochrome) 
Protein accessionYP_001766690 
Protein GI170745233 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID[TIGR00387] glycolate oxidase, subunit GlcD 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00822967 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAACGCAC CCGCTCCCGC CCCCCGCACC CGCCCGGACG CGGCGACGAT CGCGGGTCTC 
ACCGAGGCCT TGCGGGCCGT GCTCGGGGAC CGGGTGACGG AGAGCCGGGC CGTGCGCGAG
CAGCACGCCA ACCAGCTCAC CTGGGCGCCG TGCGAGCCGC CGGACCTCGT GGTCTTCCCG
CACACCACCG CGGAGGTGCA GGCCGTCGTG CGCGCCTGCG CCGAGCGCGA CGTGCCGATC
GTGCCCTACG GCGTCGGCAC CTCCCTCGAG GGCCACGTCA ACGCGCCGTT CGGCGGCGTC
TCGATCGACA CGGGCGCGAT GAATCGCGTC CGCGCGGTCA ATGCCGACGA CCTCGACTGC
ACGGTCGAGG CCGGCGTCAC CCGCAGGGCG CTGAACGCGT ACCTGCGCGA TACCGGCCTG
TTCTTCCCCA TCGATCCCGG GGCGGACGCC ACGATCGGCG GGATGGCGGC GACGCGGGCA
TCGGGCACCA ACGCCGTGCG CTACGGGACG ATGAAGGATG CGGTGCTCGC GCTCACCGCG
GTGATGCCGA ACGGCGACAT CGTCACGACC GCCCGGAGGG CGCGCAAGTC GTCCGCCGGC
TACGATCTCA CCCGGCTCCT CGTCGGCTCG GAGGGCACGC TCGGGATCAT CACCGAGGTC
ACGCTGCGCC TGCACGGCAT CCCCGAGGCG ATCTCGGCGG GCATCTGCCC GTTCCCCTCG
ATCAAGGCGG CCTGCGACGC CACGATCCTG ACGATCCAAT CCGGCATCCC GGTCGCGCGC
ATCGAGCTGC TCGACGAGGT GCAGGTCGCG GCCTGCAACC GCTACTCGAA GCTGACCCTG
CCGGAGACCC CGCTGCTCCT GGTCGAGTTC CACGGCACGG ACGCGGGCGC GCGGGAGCAG
GCCGAGCGGT TCGGCGAGAT CGCCGCCGAG CTCGGCGGCG GCCCGTTCGA CTGGGCGACC
GGGGCCGACG CGCGCGCACG CCTCTGGCAG GCGCGCCACG ACGTCTACTG GGCCGCGGTC
GCGCTGCGGC CCGGTCCCAC GATCAAGAAC ATGTCGACCG ATGTCTGCGT GCCGATCTCG
CGGCTCGCGG AATGCGTGGA GGCGACGAAG CGCGACATCG CCGCGACCGG GCTCACGGCG
CCGATCGCCG GCCATGTCGG CGACGGCAAC TTCCACACCC TCCCGCTCGT CGATGCCGAC
AGCCCCGAGG AGATGTCCGC GGTGGCCGGC TTTCTCGACC GGCTCGTCGC CCGCGCGCTG
GACCTGGGCG GCACCTGCAC GGGCGAGCAC GGGATCGGCC AGAAGAAGAT GCGCTTCATG
GAGAGCGAGC ACGGGCCGGA GGCGCTCGGC CTCATGCGGA CCCTCAAGCG CGCCATCGAT
CCCCGGAACC TCATGAACCC CGGCAAGCTG ATCCCCTGA
 
Protein sequence
MNAPAPAPRT RPDAATIAGL TEALRAVLGD RVTESRAVRE QHANQLTWAP CEPPDLVVFP 
HTTAEVQAVV RACAERDVPI VPYGVGTSLE GHVNAPFGGV SIDTGAMNRV RAVNADDLDC
TVEAGVTRRA LNAYLRDTGL FFPIDPGADA TIGGMAATRA SGTNAVRYGT MKDAVLALTA
VMPNGDIVTT ARRARKSSAG YDLTRLLVGS EGTLGIITEV TLRLHGIPEA ISAGICPFPS
IKAACDATIL TIQSGIPVAR IELLDEVQVA ACNRYSKLTL PETPLLLVEF HGTDAGAREQ
AERFGEIAAE LGGGPFDWAT GADARARLWQ ARHDVYWAAV ALRPGPTIKN MSTDVCVPIS
RLAECVEATK RDIAATGLTA PIAGHVGDGN FHTLPLVDAD SPEEMSAVAG FLDRLVARAL
DLGGTCTGEH GIGQKKMRFM ESEHGPEALG LMRTLKRAID PRNLMNPGKL IP