| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_5906 |
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| Symbol | |
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| ID | 6142076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium radiotolerans JCM 2831 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010510 |
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| Strand | - |
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| Start bp | 155996 |
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| End bp | 157360 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641639964 |
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| Product | HlyD family type I secretion membrane fusion protein |
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| Protein accession | YP_001766647 |
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| Protein GI | 170745190 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.418691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00374749 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGTCC CGCGCGCCGC GATCTTGAGC CCGTCACCTG TCCAGAAAGC GCCCGATGGA
GAGCGGCCGG GTGTCACCGG CCTGACGAAC TGGCGCGCCT ACGCGGTGGC CGGCTACGCG
CTCATCTTCG CGACGTTCGG AGTAGTCGGC ACCTGGGCCA CGTTCGCGCG CCTCGACCGG
GCGGTCATCA GTCCCGGGGT GGTGGTCGCG GAAGGCAGCC GCAAGGTGGT GCAGCATCTC
GAAGGTGGCA TCGTCCAGGA GGTGCTGGTC CGGGACGGAC AGACGGTCCG CGCGGGCGAT
GTCCTGCTCC GCATCGATCC GGTGCAATCG CGTGCCAGCA ACGATCTCCT CCGTGGCCAG
CTCGACGCGG CCCTGATCCT CGAAGCCCGC CTCCGTGCGG AGCAGAGCCA GGCGCAAGAC
CTGCTCCTGC CGCCGGAGAT CGCGGCGCGG CGCGCTGAGC CGGCCGTCGC CGGGATGATC
GACGATCAGG CCAGCCAGCT GTCGGAGCGG CGCGGGTCCT TCCAGGCACA GCTCGCCCTC
ATCCAGGCGC GCGTCACCCA GTTGAGGACG GAGATTTCCG GGCTCGCGGT CGAGAAGGCC
TCGGTCGAGC AGCAGGTCGC CCTGATCCAG CAGGAGCTGG AGGGCCTGCG CGGCCTGCGC
GAGAAGAACC TCATCCCGCT CTCGCGCGTC CTGATGATGG AACGCGAGCA CGCGCGCCTG
GAAGGCGTGA TCGGGCGGTC CGTGGCGGAG ACCGCCAAGG CGCAGAACGG CATCAACGAA
GCGGGGATGC AGACCGCGCA GCTTAAACAG AAGCTACAGG AGGCGCTGAC TGCACAGCTC
CTGGACACGC GGCAGAAGAT CGCCGAGCTG CGCGAGAAGC TCATCGTGGC CCAGGATGTC
CTCCGTCGGC ACGAGGTCCG GGCCTCGCAT CAGGGCGTCA TCCAGGGCTT GAAGGTCTAC
ACGATCGGGC AGGTGGTCCG CTCGGGCGAG CCGCTGATGG AGATCGTTCC GACGAACGAC
AGGCTGGTGA TCAGCGTGCA GTTCGCGCCG AACGATCTCG AGGCGGTCCA TGCCGGCCTG
CGGGCCGAGG TGAAGTTCCC GGCTTTTCAG ACGCGCCGCA TGTCGGCGAT CTTCGGCACG
CTGACGATGG TGTCCCGCGA TCGCCTGATC GACGACGGCA CGAAACACGC CTACTTCGCC
GGCACCGTCG AGATCGACGA CCGCCAACTC CCGGACGACG TACGGTCACG CCTCCTGGCC
GGCCTGCCTG CCGAGGTCGT CGTCTCGGCC GGCGAGCGCA CCGCGCTCGA CTATCTGGTG
GCTCCGTTCT TCGACGCTCT GGGACGCAGT TTCCATGAGC GCTAG
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| Protein sequence | MTVPRAAILS PSPVQKAPDG ERPGVTGLTN WRAYAVAGYA LIFATFGVVG TWATFARLDR
AVISPGVVVA EGSRKVVQHL EGGIVQEVLV RDGQTVRAGD VLLRIDPVQS RASNDLLRGQ
LDAALILEAR LRAEQSQAQD LLLPPEIAAR RAEPAVAGMI DDQASQLSER RGSFQAQLAL
IQARVTQLRT EISGLAVEKA SVEQQVALIQ QELEGLRGLR EKNLIPLSRV LMMEREHARL
EGVIGRSVAE TAKAQNGINE AGMQTAQLKQ KLQEALTAQL LDTRQKIAEL REKLIVAQDV
LRRHEVRASH QGVIQGLKVY TIGQVVRSGE PLMEIVPTND RLVISVQFAP NDLEAVHAGL
RAEVKFPAFQ TRRMSAIFGT LTMVSRDRLI DDGTKHAYFA GTVEIDDRQL PDDVRSRLLA
GLPAEVVVSA GERTALDYLV APFFDALGRS FHER
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