| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_5870 |
|---|
| Symbol | |
|---|
| ID | 6142040 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010510 |
|---|
| Strand | - |
|---|
| Start bp | 108485 |
|---|
| End bp | 109474 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641639925 |
|---|
| Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
|---|
| Protein accession | YP_001766611 |
|---|
| Protein GI | 170745154 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.626499 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.186079 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACG ACACGTTGAG CCGGATCGCC CCGTCCCGCC GATCGGTGCT GCGCACTGGC
CTCGGCGCCG CCGCCACCCT GGCGCTCGGC ACGCCCGCGG TGCTGGCCGG TCCCCGCGAG
GTGAAGATCA GCATGCAGCG CTCCTCGGTG CTGTTCACCG TGCTGAAGGT GAAGGGGACG
CTCGCCGAGC GCCTCGCGCC GCTGGGCTTC ACCCCGAGCT GGCACCTGTT CACCAGCGTG
ATCGAGCCCA TGTCGGCCGG CGCCGTGGAC ATCCACGCCG ACGTCGCCGA CGCGGTGCCG
ATCTTCACGC AGTCGGCCAG GGCGCCGCTG ACCTTCTACG CCCGCGAGCG CGGCGCGCCG
GCCGCCGAGG CGATCATCGT CCCGGCGGAC TCGCCGATCC GCACGGTCGC GGATCTCAAG
GGCCGCACGG TCGGCGTCTC CCGGGGCTCG GGCAGCCACT ACGTGCTCGC CGCCGCCCTG
AAGCGCGCCG GCCTGAGTTT TTCCGACATC AAGCCGGCCT ACCTCCAGGC ACCGGAGGGC
GCGGCCGCCT TCGAGCAGGG CAGCCTCGAC GCGTGGTCGA TCTGGGACCC GTTCCTCGCC
TTCGCGCAGG CCAAGCGCCC GGTGCGGGTC GTCGCCGACG CCACCGGTCT GACGAGCTAT
CACCGCTACT ACCTCGTCAA CGACAGCTTC GTCGCCGCGC AGCCGGAGGT CGTCGCCACG
GTTTACCGGG CGCTGGTCGA GGCCGGCGCC TGGATGCGGG CGAACCCGCA GGAGGCGGTG
GCGCTCCTCG CGCCGATCTG GGGCGACCTG CCGCCCGCGG TGGTGGCCGC CGCCAACAGC
CGCCGCACCT ACGCGGTCGA GCCGGTGGAC CGCGCCCAGC TCGGCGAGCA GCAGGCCATC
GCCGACGTGT TCTACGAGGC CAAGCTCATC CCGCGCCGGA TCGACGCCAC CGACGTGCCG
ATCTGGCAGG CGCCCGTGGG TCGGGGCTGA
|
|---|
| Protein sequence | MTDDTLSRIA PSRRSVLRTG LGAAATLALG TPAVLAGPRE VKISMQRSSV LFTVLKVKGT
LAERLAPLGF TPSWHLFTSV IEPMSAGAVD IHADVADAVP IFTQSARAPL TFYARERGAP
AAEAIIVPAD SPIRTVADLK GRTVGVSRGS GSHYVLAAAL KRAGLSFSDI KPAYLQAPEG
AAAFEQGSLD AWSIWDPFLA FAQAKRPVRV VADATGLTSY HRYYLVNDSF VAAQPEVVAT
VYRALVEAGA WMRANPQEAV ALLAPIWGDL PPAVVAAANS RRTYAVEPVD RAQLGEQQAI
ADVFYEAKLI PRRIDATDVP IWQAPVGRG
|
|---|
| |