Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_5848 |
Symbol | |
ID | 6142018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010510 |
Strand | + |
Start bp | 87819 |
End bp | 88391 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641639903 |
Product | hydroxyisourate hydrolase |
Protein accession | YP_001766589 |
Protein GI | 170745132 |
COG category | [R] General function prediction only |
COG ID | [COG2351] Transthyretin-like protein |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR02962] hydroxyisourate hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0613871 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00026614 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAGGAGA GGGAGGCCGT CTTGAGACAC GTACTTGACC GACAGGCTCT GACGCGGCGC GGCCTCGTGG CGACGGGGCT CGGCGCCGCG GCCGCGATCT CCGCGGGTCC GGCGCTGGCC CAGGGCACGC CCGCACCGGC GGCTCCGGCC AGCCCTCCGG CCAACTCTTC CGCCAAGCCC GGCACGTTGA GCGCCGCACC CGTCTCGCAG GCCGGCCTCT CGCCGCGGCT GACCCTGCAC GCCATCGACA ATTTCCACGG CACGCCCGGT GCCGGCATGG TCTGCGACCT CGCGCTGCAC GACGGCGACG GTTACCGGCT GATCAAGACG GTCACCACCG CGCCGAACGG TCGGACCGCC GAGCCGCTCC TGGTCGACGA GGCCTTCAAG CCGGGCCGCT ACGAGCTGGT GATGCACGTC GAGGCGTATT TCGCGGGTCT CGGCGTGAAG CTCCCGACCC CGAACTTCCT CGGCCTCGTG CCGATCCGCT TCCGGATCCG CGACGCGAGC CAGCGCTACC ACCTGCCGGT GCTGTTCACG CCCTGGGGCT ACTCCTACTA CCGCGGCAGC TGA
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Protein sequence | MQEREAVLRH VLDRQALTRR GLVATGLGAA AAISAGPALA QGTPAPAAPA SPPANSSAKP GTLSAAPVSQ AGLSPRLTLH AIDNFHGTPG AGMVCDLALH DGDGYRLIKT VTTAPNGRTA EPLLVDEAFK PGRYELVMHV EAYFAGLGVK LPTPNFLGLV PIRFRIRDAS QRYHLPVLFT PWGYSYYRGS
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