Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_5839 |
Symbol | |
ID | 6142009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010510 |
Strand | + |
Start bp | 77368 |
End bp | 77964 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641639894 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_001766580 |
Protein GI | 170745123 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.242407 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00194364 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCGCAGG AAGCAATCCT CATCATCGAT GACCACGCGC TGTTCCGATC CGGCATCGTC TCGATGCTGT CGACGGCGTT CGACGAGATT CCGGTTCTCG ACAGTGCATC GCTGCACGAG GCGCTCGCCA TCGTCGCCGT CGTCCCGACG ATTGTCCTCC TCGACATCCA GTTGCCGGGC ATCAGCGGCC TCGAGGGGAT GGGCCTGCTC CAGCAACGCT GGCCGGCCGC CCGGATCGTC GTGGTGTCCG GCCTGGATCT GCCCGACACC GTCAGCACGG CCCTGGCGCA TGGCGCCTGC GCGTTCCTGT CCAAGGCCGA CCGTCCCGAC CGGATGATGA CGGTCCTGCG CGAGATGCTC GCGCGGTCGT CCGCGGCCCC GCGCGCGGGC GCCGCCCTCT GCCCGACGCT CACGCCGCGC CAGGCCGAGG TGCTGACCCT GGTCGGGCGC GGCTTGTCCA ACAAGATGAT CGGACGCAGT CTCGGCCTGT CGGAACACAC GGTCCGGGGC CACGTGCAGG GGCTGCTGTC GGTGCTGGGG GTGACGCGGC GCGCGGAGGC TGTCTTCAAG GCTCAGCAAC TCGGCCTGAT CCGATGA
|
Protein sequence | MAQEAILIID DHALFRSGIV SMLSTAFDEI PVLDSASLHE ALAIVAVVPT IVLLDIQLPG ISGLEGMGLL QQRWPAARIV VVSGLDLPDT VSTALAHGAC AFLSKADRPD RMMTVLREML ARSSAAPRAG AALCPTLTPR QAEVLTLVGR GLSNKMIGRS LGLSEHTVRG HVQGLLSVLG VTRRAEAVFK AQQLGLIR
|
| |