| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_5828 |
|---|
| Symbol | |
|---|
| ID | 6141998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010510 |
|---|
| Strand | + |
|---|
| Start bp | 65071 |
|---|
| End bp | 66354 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641639883 |
|---|
| Product | dihydroorotase |
|---|
| Protein accession | YP_001766569 |
|---|
| Protein GI | 170745112 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3964] Predicted amidohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.000105478 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGACAATC GCCGCTATGA TCTGGTTCTG CGGGGCGGGC GAGTCATCTG CCCGGCCTCC
GGCATCGACG GCATCCGCGA CGTGGCGGTG CAGGACGGGC GCATCGCCGC CGTAGCGGAG
ACGATCCTGC CCTCGGCCGC CGCCGAGGTG GTCGACGTCG CGGGCAAGCT CGTCCTGCCC
GGCATGATCG ACACCCATGC GCACGTCTAC CAGTACGTCA CCGGCCGGTT CGGCCTGAAT
CCCGACATGG TCGGCGTGCG CTCGGGCGTC ACCACGGTGG TGGACCAGGG CGGCCCGTCC
TGCATGACCC TGCCGGGCTT CCGCCACTTC ATCGCCGAGC GGTCGGAGAC GCAGGTGCTC
GCCTTCCTGT CGGCCTACCT CGTCGGTGGC CTGGAGGGGC ATTTCTACCC GAACCTCTAC
AGCCCGGACG GCGTCGACAT CGACGCCACG GTGAAGTCGG CCACCGAGAA CCGCGACCTC
GTGCGCGGCA TCAAGGGCCA TGCCGAGATC GGCGGTTTCG CCCGTTGGGG CATCAAGGTG
ATGGAGATGG CGGCCGAGAT CAGCCGCCGC GCCGACATGC CGCTCTACGT GCATTTCGGC
CAGCTCTGGG GCCTGCCGGA ATCGGGCGCC AACGGCGAGG ATGCCGACAC CATCGTCGAG
CGGGTCATCC CGCTGCTGCG GCCGGGCGAC GTGCTGGCCC ATCCCTTCAC CCGCCACCCG
GGCGGCTTCA TCAACGAGCA GGGCGAGGTC CACCACATCA TCCGCCGGGC CATTGAGGCC
GGGCTGAAGG TCGACGTCGG CCACGGCAGC CACTTCTCCT ACCGCGTGGC GCGGGCCTCC
CTGCCGGCCG GCGTGATCCC CTACACGCTG GGCGCCGACA TGCACGGCTA CAACACCGAG
ATCCCCGAGG TGAAGAAGCC CGCCGGCACA CCGGACGAGC ACCACGACGA CGAGAACCAC
CCCTTCCTCG GGCAGGCCCG GTTCAGCCTC ACCCAGGCGA TGAGCTCGAT GATGGCGCTC
GGCATCCCGC TGGAGGACGT GGTGCCGATG GTGACGTCGC ACCCGGCCGA GATGCTGCGC
ATGAGCGACC GGATCGGCGC CCTCAAGGTC GGCTACGCAG CCGACGTCTC GGTTCTGCAC
GACGATCGCG GCCGCTTCCT GCTGCGCGAC AACGAGGACA CGCGGGTGAT CGCCGACCGC
CTGCTGCGCC CGGCCTTCTG CCTGCGCGCA GGGAAGCGCT TCGAGGCCGA CTCGCCGATC
CTGCCCCAGG CGATCGCGGC CTGA
|
|---|
| Protein sequence | MDNRRYDLVL RGGRVICPAS GIDGIRDVAV QDGRIAAVAE TILPSAAAEV VDVAGKLVLP
GMIDTHAHVY QYVTGRFGLN PDMVGVRSGV TTVVDQGGPS CMTLPGFRHF IAERSETQVL
AFLSAYLVGG LEGHFYPNLY SPDGVDIDAT VKSATENRDL VRGIKGHAEI GGFARWGIKV
MEMAAEISRR ADMPLYVHFG QLWGLPESGA NGEDADTIVE RVIPLLRPGD VLAHPFTRHP
GGFINEQGEV HHIIRRAIEA GLKVDVGHGS HFSYRVARAS LPAGVIPYTL GADMHGYNTE
IPEVKKPAGT PDEHHDDENH PFLGQARFSL TQAMSSMMAL GIPLEDVVPM VTSHPAEMLR
MSDRIGALKV GYAADVSVLH DDRGRFLLRD NEDTRVIADR LLRPAFCLRA GKRFEADSPI
LPQAIAA
|
|---|
| |