| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_5806 |
|---|
| Symbol | |
|---|
| ID | 6141976 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010510 |
|---|
| Strand | - |
|---|
| Start bp | 44214 |
|---|
| End bp | 45806 |
|---|
| Gene Length | 1593 bp |
|---|
| Protein Length | 530 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641639861 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001766547 |
|---|
| Protein GI | 170745090 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.068843 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.564208 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGAC GCACGCTGTT GCAGGGAGCC GGCGCCCTCG TCGCCGGCGC CGTCGCGGCG
CCGGCCCTCG TCCGTGCGGA GGCTGCCAGG ACCCTGCGCT TCATCCCGCA GCAGGATCTC
GTCACCCTCG ATCCGGTGAC GACCTTCGCG TACATCACCC GCAACCACGG CTACATGGTC
TTCGACACGC TCTACGGCAT GGACGCAGCC TATCGCGCCA CGCCGCAGAT GGTCGAGGGC
CACCGCGTCG AGGCGGACGG GCGCCGCTGG GACCTGACCC TGCGCGAGGG CCTGCGCTTC
CACGACGGGA CGCCGGTGCT GGCCCGCGAC TGCGTCGCCT CCCTGCGGCG CTGGGCGAAG
CGCGACCCGT TCGGCGGCTC CCTCATGGAG GCGACCGACG AGCTCTCCGC GCCCGACGAC
CGGACGATCC GGTTCCGCCT CAAGCACCCG TTCCCGCTGC TGCCGATCGC GCTGGGCAAG
GCGTCCGTCC CGGTCTGCGC CATGATGCCG GAGCGCCTCG CCGCCACCGA CCCGTTCCAG
CAGGTGCCGG AGCTCATCGG CTCGGGCCCG TTCCGCTTCA AGGCGGACGA GCGGGTGCCC
GGCGACCGCG TCGTCTACAC CCGCTTCGAG GGCTACGTGC CGCGCCGGGA CGGCCCGCTC
ACCTGGACCT CGGGTCCGAA GGTCGTCCAC TTCGACCGGG TCGAGTGGCG CGTGATCGGC
GACACCTCCA CGGCGACCTC GGCGCTGATC GCCGGCGAGG CGGACTGGCA GGAATACGCC
TCGCACGACC AGCTCGGGCT CCTGCACGCC GCCAAAGGCG TGAGCACCCG CGTCCTCGAC
CCGACCGGCT TCGTGACCAT GCTGCGGGTC AACCACCTGC AGCCGCCCTT CAACAACCCG
GCGATCCGGC GGGCGCTCTG GGGCGGGATC GACCAGACCG CCTGCATGCA GGGGGTCGTC
GGCGCCGAGG ATCCCGGCCT GTTCCACGTG CCTCTCGGCT TCTTCTGCCC GGGCACGCCG
ATGGCCTCGA CGGACGGATT GCAGCCGCTC ACGGATCCGC GCGATCCGGC GCGGGTGCGC
GCCGACCTCA AGGCCGCCGG CTACAATGGC GAGACCGTGC TGCTGATGGT GCCGTCGAAC
TCGGCGCCCC TTCTGGCGCT CGGTCAGGTC GCGGCCGACC TGCTCCAGCG CGTCGGCATG
ACGGTCGAGG TCTACGCGGT CGAGTTCAAC GCGATGCTGC AGCGGCGCAA CCGCAAGGGG
CCGGTCTCCG AGGGCGGCTG GAGCGCCTTC GTCACCAACT GGTCCGGCAT GGATTGGCTC
AACCCCGCGG GCTACATCGC CCTGCGCGGC ACCGGCGAGA CCGGCTACGC TGGCTGGGCC
ACGACCCCGC GGATCGAGTC CCTGCGCGAC GCCTGGCTCA CAGCCCCGGA CGAGGCGGCG
CGCGCCGCGC TCTGCCGGGA CATCCAGCTC CAGGCGATGC AGGACGTGCC CTACTATCCC
CTCGGGCAGT ACCTGCAGCC GACCGCCTAC CGCTCCCGGC TCACCGGCAT CCTCGACGGG
TTCCCGACCT TCTGGAACGT CCGGCCCGCC TGA
|
|---|
| Protein sequence | MKRRTLLQGA GALVAGAVAA PALVRAEAAR TLRFIPQQDL VTLDPVTTFA YITRNHGYMV
FDTLYGMDAA YRATPQMVEG HRVEADGRRW DLTLREGLRF HDGTPVLARD CVASLRRWAK
RDPFGGSLME ATDELSAPDD RTIRFRLKHP FPLLPIALGK ASVPVCAMMP ERLAATDPFQ
QVPELIGSGP FRFKADERVP GDRVVYTRFE GYVPRRDGPL TWTSGPKVVH FDRVEWRVIG
DTSTATSALI AGEADWQEYA SHDQLGLLHA AKGVSTRVLD PTGFVTMLRV NHLQPPFNNP
AIRRALWGGI DQTACMQGVV GAEDPGLFHV PLGFFCPGTP MASTDGLQPL TDPRDPARVR
ADLKAAGYNG ETVLLMVPSN SAPLLALGQV AADLLQRVGM TVEVYAVEFN AMLQRRNRKG
PVSEGGWSAF VTNWSGMDWL NPAGYIALRG TGETGYAGWA TTPRIESLRD AWLTAPDEAA
RAALCRDIQL QAMQDVPYYP LGQYLQPTAY RSRLTGILDG FPTFWNVRPA
|
|---|
| |