Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_5797 |
Symbol | |
ID | 6141967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010510 |
Strand | + |
Start bp | 30067 |
End bp | 31467 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641639852 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_001766538 |
Protein GI | 170745081 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.203932 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACG ATCGGGACAT CAGCGTCCTC CGCGTTCTCC TTCCGGACGG AGGCTGGATT TCGACGCATG AGGACATCAC GGAGCGCCGT CGGAGCGAAG CGCGCCTGCG CTTCCTCGCG CGGCACGACG TTCTGACCCA ATTGCCGAAT CGCCTGCATT TCGAGGAGGT CGTCGAACGC GAGCTGGCAG TGCGAGCCGA TCGAGCCGAG GCAGTGGCCC TTCTCTGCCT CGATCTCGAC GGCTTCAAGC AGGTCAACGA TCTCTTCGGT CATCCGGCCG GGGACCGCCT GCTGATCGAG GTCGCCGCGC GCCTGAAGGC ATTGATCGGC GCGCGCGGCG CGGTCGCGCG CCTCGGCGGC GACGAATTCG CGGTGCTGGC GACAGATCTC GCCGCCGGGC AAGCTGCCGC GCGGGCCCAG GCTATCATCG ATGCGATCTC AGCGCCCTAC GCGGACGGCG AGCTGAGGTA TTCCATCAGT TGCAGCGTCG GCATCGCCCT CTTCCCGCAT GATGGCGACA CCTACGACGC GGTGCTGTCC GCTTCCGATA TGGCGCTCGT GCGCGCCAAG AAGGAAGGCA AGGGAACCTA CCGCTTCTTC GAGGCGGATA TGGACAAGGC GGCTTTCGAG CGGCAACGAT TGGCTCTGGA CCTGCGCGCG GCCATCGGGA CGGGGCAGTT CGCGCTGCAT TACCAGCCCC AGTTCAGGAT CGCCGCCGAT CGCGCCTGCG GCTTCGAGGC GCTCCTGCGA TGGACCCATC CGACCCGCGG GCCGATTTCG CCGGCGCAGT TCATACCGCT GGCAGAGGAG ACAGGGGCGA TCCTCCCACT CGGCGAGTGG GTGCTCCGTG AGGCCTGCCG CGAGGCTGCG AGCTGGACGT TGCCCCTCGG CATCGCTGTC AATCTCTCGA TCGCGCAGCT GCAGCAAGCT GGCCTGTGCG ATGTCGTCGG TGCGGTGCTC GAGGAGACCG GACTGAAGGC CGACCGTCTC GAACTCGAGG TGACCGAGAG CCTCTTCCTG AAGGGGTCGG CACGCGCGCA GGAGATGCTG CGCGACCTGA AAGCGCTCGG CGTGCGCATC TCGATGGATG ATTTCGGAAC CGGATACTCA TCACTGGCAA CGTTGGAAGC TTTTCCGTTC GACAAGATCA AGATCGATCG GTCGTTCGTG TGGCAGATCG GCGTGACCAG CAAAGGCGGC GCGATCGTCC GGGCGATCCT GAGTCTCGGC GAGAGCTTGG ACATCCCGGT CATCGCGGAG GGCGTCGAGA CTGAGGGGCA GCTGGCCTTC TTGCGGCAAC ACGGTTGTGC AGAGATACAA GGCTATCTGC GCGGCAAACC GCAGCCGATC GCCTCTTACC GCGCGCTCGT CGGTCCCGAT CGTGATCTCA AGGTCGCCTA G
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Protein sequence | MTDDRDISVL RVLLPDGGWI STHEDITERR RSEARLRFLA RHDVLTQLPN RLHFEEVVER ELAVRADRAE AVALLCLDLD GFKQVNDLFG HPAGDRLLIE VAARLKALIG ARGAVARLGG DEFAVLATDL AAGQAAARAQ AIIDAISAPY ADGELRYSIS CSVGIALFPH DGDTYDAVLS ASDMALVRAK KEGKGTYRFF EADMDKAAFE RQRLALDLRA AIGTGQFALH YQPQFRIAAD RACGFEALLR WTHPTRGPIS PAQFIPLAEE TGAILPLGEW VLREACREAA SWTLPLGIAV NLSIAQLQQA GLCDVVGAVL EETGLKADRL ELEVTESLFL KGSARAQEML RDLKALGVRI SMDDFGTGYS SLATLEAFPF DKIKIDRSFV WQIGVTSKGG AIVRAILSLG ESLDIPVIAE GVETEGQLAF LRQHGCAEIQ GYLRGKPQPI ASYRALVGPD RDLKVA
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