Gene Mrad2831_5797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_5797 
Symbol 
ID6141967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010510 
Strand
Start bp30067 
End bp31467 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content65% 
IMG OID641639852 
Productdiguanylate cyclase/phosphodiesterase 
Protein accessionYP_001766538 
Protein GI170745081 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.203932 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG ATCGGGACAT CAGCGTCCTC CGCGTTCTCC TTCCGGACGG AGGCTGGATT 
TCGACGCATG AGGACATCAC GGAGCGCCGT CGGAGCGAAG CGCGCCTGCG CTTCCTCGCG
CGGCACGACG TTCTGACCCA ATTGCCGAAT CGCCTGCATT TCGAGGAGGT CGTCGAACGC
GAGCTGGCAG TGCGAGCCGA TCGAGCCGAG GCAGTGGCCC TTCTCTGCCT CGATCTCGAC
GGCTTCAAGC AGGTCAACGA TCTCTTCGGT CATCCGGCCG GGGACCGCCT GCTGATCGAG
GTCGCCGCGC GCCTGAAGGC ATTGATCGGC GCGCGCGGCG CGGTCGCGCG CCTCGGCGGC
GACGAATTCG CGGTGCTGGC GACAGATCTC GCCGCCGGGC AAGCTGCCGC GCGGGCCCAG
GCTATCATCG ATGCGATCTC AGCGCCCTAC GCGGACGGCG AGCTGAGGTA TTCCATCAGT
TGCAGCGTCG GCATCGCCCT CTTCCCGCAT GATGGCGACA CCTACGACGC GGTGCTGTCC
GCTTCCGATA TGGCGCTCGT GCGCGCCAAG AAGGAAGGCA AGGGAACCTA CCGCTTCTTC
GAGGCGGATA TGGACAAGGC GGCTTTCGAG CGGCAACGAT TGGCTCTGGA CCTGCGCGCG
GCCATCGGGA CGGGGCAGTT CGCGCTGCAT TACCAGCCCC AGTTCAGGAT CGCCGCCGAT
CGCGCCTGCG GCTTCGAGGC GCTCCTGCGA TGGACCCATC CGACCCGCGG GCCGATTTCG
CCGGCGCAGT TCATACCGCT GGCAGAGGAG ACAGGGGCGA TCCTCCCACT CGGCGAGTGG
GTGCTCCGTG AGGCCTGCCG CGAGGCTGCG AGCTGGACGT TGCCCCTCGG CATCGCTGTC
AATCTCTCGA TCGCGCAGCT GCAGCAAGCT GGCCTGTGCG ATGTCGTCGG TGCGGTGCTC
GAGGAGACCG GACTGAAGGC CGACCGTCTC GAACTCGAGG TGACCGAGAG CCTCTTCCTG
AAGGGGTCGG CACGCGCGCA GGAGATGCTG CGCGACCTGA AAGCGCTCGG CGTGCGCATC
TCGATGGATG ATTTCGGAAC CGGATACTCA TCACTGGCAA CGTTGGAAGC TTTTCCGTTC
GACAAGATCA AGATCGATCG GTCGTTCGTG TGGCAGATCG GCGTGACCAG CAAAGGCGGC
GCGATCGTCC GGGCGATCCT GAGTCTCGGC GAGAGCTTGG ACATCCCGGT CATCGCGGAG
GGCGTCGAGA CTGAGGGGCA GCTGGCCTTC TTGCGGCAAC ACGGTTGTGC AGAGATACAA
GGCTATCTGC GCGGCAAACC GCAGCCGATC GCCTCTTACC GCGCGCTCGT CGGTCCCGAT
CGTGATCTCA AGGTCGCCTA G
 
Protein sequence
MTDDRDISVL RVLLPDGGWI STHEDITERR RSEARLRFLA RHDVLTQLPN RLHFEEVVER 
ELAVRADRAE AVALLCLDLD GFKQVNDLFG HPAGDRLLIE VAARLKALIG ARGAVARLGG
DEFAVLATDL AAGQAAARAQ AIIDAISAPY ADGELRYSIS CSVGIALFPH DGDTYDAVLS
ASDMALVRAK KEGKGTYRFF EADMDKAAFE RQRLALDLRA AIGTGQFALH YQPQFRIAAD
RACGFEALLR WTHPTRGPIS PAQFIPLAEE TGAILPLGEW VLREACREAA SWTLPLGIAV
NLSIAQLQQA GLCDVVGAVL EETGLKADRL ELEVTESLFL KGSARAQEML RDLKALGVRI
SMDDFGTGYS SLATLEAFPF DKIKIDRSFV WQIGVTSKGG AIVRAILSLG ESLDIPVIAE
GVETEGQLAF LRQHGCAEIQ GYLRGKPQPI ASYRALVGPD RDLKVA