Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_6330 |
Symbol | |
ID | 6141900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010509 |
Strand | + |
Start bp | 27359 |
End bp | 28114 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641639809 |
Product | VirB8 family protein |
Protein accession | YP_001766495 |
Protein GI | 170745037 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3736] Type IV secretory pathway, component VirB8 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGGAC GCAATAAGCG CCCCAAGGTG CATTCCACGA TGAGGCAAAC TGGCAACGCG ACGATCATCG ACGTCACGCC AGAGGATAGC CCGTACTACG AACAGGTGAT CGGCTGGGAA GCTTCCCGCA CCCTCGCCCT GGAAAAGTCC GAGCGGCGCG CCTGGCGCGT CGCTGGCGCG TTCGGCGTCG CCTTCGTTCT GGTGGCGATC GGCATTGCCG TCATGGCGCC GCTGAAGGAG AGCATTCCCT ACGTCATCCG CGTGGACAGC GCGACCGGCG TGCCGGATCT CGTCACTGCG CTCGACAGCA AGGGTGTGGG ATACGACGAG GCGATGGACC GGTATTGGCT GGCCCAGTTC GTGCGCGCCC GTGAGACCTA CGACTGGTAC ACCCTGCAAA AGGACTACGA CACTGTAGGC CTGCTGTCGG CGCCGAATGT CGCCAAGCAA TACGGCGAGC TTTTCACCGG CGACAATGCG CTGGACAAGA AGTTCGGATC GCAGATCCGT GCGACGGTTG AGATCGTCAG CGTCGTTCCC AACGGAGACG GGGTCGGTAC GGTCCGTTTC ATCAAGACGA CGAAGCGCGC CGAGGAAACC GGCCGTGGGC AAGTCACGCG TTGGATCGCG ACGATCGCCT ACAAGTACCA GAACCCATCG GTCCTGAAAG AGTCGGCGCG GCTGACTAAC CCCCTCGGCT TCCAGGTCAC GAGCTATCGC GCCGACCCGG AGCTGACGAC GGAGGGCACG CGATGA
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Protein sequence | MFGRNKRPKV HSTMRQTGNA TIIDVTPEDS PYYEQVIGWE ASRTLALEKS ERRAWRVAGA FGVAFVLVAI GIAVMAPLKE SIPYVIRVDS ATGVPDLVTA LDSKGVGYDE AMDRYWLAQF VRARETYDWY TLQKDYDTVG LLSAPNVAKQ YGELFTGDNA LDKKFGSQIR ATVEIVSVVP NGDGVGTVRF IKTTKRAEET GRGQVTRWIA TIAYKYQNPS VLKESARLTN PLGFQVTSYR ADPELTTEGT R
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