| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3181 |
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| Symbol | |
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| ID | 6124841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | - |
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| Start bp | 3530140 |
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| End bp | 3531801 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641639774 |
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| Product | putative inner membrane protein translocase component YidC |
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| Protein accession | YP_001766460 |
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| Protein GI | 170734513 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.118061 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATCA AACGCACCGT CCTATGGGTG ATCTTCTTCA TGTCAGCTGT CATGCTGTAC
GACAACTGGC AGCGGGACCA TGGACGCCCG TCGATGTTCT TCCCGAGCGC CACGCACACG
GCCCCGGCCG CTGCCGGCGG CGCATCGGGC ACGGGCGCGA CGACGACCGC AGGTGACGTG
CCTGCCGCTG CAGCCGGCGC CGCACCGTCG ACGACGGCTC CGGCCGCGCA GGCGCAGCTC
GTGAAGTTCT CGACCGACGT GTACGACGGC GAAATCGACA CGCGCGGCGG CACGCTCGCG
AAGCTGACGC TGAAGAAGCA GGGCGACGGC AAGCAGCCCG ACCTGTACAT CACGCTGTTC
GACCACACGG CCGGCCACAC GTATCTCGCA CGCACGGGCC TGCTCGGCGG CGATTTCCCG
AACCACAACG ACGTCTACAC GCAGCTGAAC CCCGGCTCGA CGTCGCTGAC GGGTGACCAG
AACACGCTGA AGCTGTCGTT CGAATCGCCG GTGAAGGGCG GCGTGAAGGT CGTGAAGACC
TACACGTTCA CGCGCGGCAG CTACGTGATC GGCGTCGATA CCAAGATCGA CAACGTCGGC
ACGGCACCCG TCACGCCGAC GGTCTACATG GAACTGGTGC GCGACAACAC GGCCGTCGAA
ACGCCGATGT TCTCGCATAC GTTCCTCGGG CCGGCGGTCT ACACGGACGC GAAGCACTTC
CAGAAGATCG ACTTCAGCGA CCTCGACAAG AACAAGGCAA ACTTCGAGAA GTCCGCGGAC
AACGGTTGGG TCGCGATGGT GCAGCACTAC TTCGCGTCGG CCTGGATTCC GCAGCAGGGC
GCGAAGCGCG ACATCTACGC TGAAAAGATC GATCCGGCGC TGTACCGCGT CGGCGTGAAG
CAGCCGGTCG CCGCGATCGC ACCGGGCCAG TCGGCCGACG TGCAGGCGCG CCTGTTCGCC
GGTCCGGAAG AAGAGCGCAT GCTCGAAGGC ATCGCGCCGG GCCTGGAGCT CGTGAAGGAC
TACGGCTGGG TGACGATCAT CGCGAAGCCG CTGTTCTGGT TGCTCGAGAA GATCCACGGC
TATGTCGGCA ACTGGGGCTG GGCGATCGTG CTGCTGACGG TGCTGATCAA GGCCGTGTTC
TTCCCGCTGT CGGCCGCGAG CTACAAGTCG ATGGCGCGCA TGAAGGAAAT CACGCCGCGC
ATGCAGGCGC TGCGCGAACG CTTCAAGAGC GATCCGCAGA AGATGAACGC CGCGCTGATG
GAGCTGTACA AGACCGAGAA GGTCAATCCG TTCGGCGGCT GCCTGCCGGT CGTGATCCAG
ATCCCGGTGT TCATCTCGCT GTACTGGGTG CTGCTCGCGT CGGTGGAAAT GCGCGGCGCG
CCGTGGATTC TGTGGATTCA CGACCTGTCG CAACGCGATC CGTTCTTCAT CCTGCCGGTG
CTGATGGCCG TGTCGATGTT CGTGCAGACG AGCCTGAACC CGACGCCGCC GGACCCGGTC
CAGGCGAAGA TGATGAAGTT CATGCCGATC GCGTTCTCGG TGATGTTCTT CTTCTTCCCG
GCAGGTCTCG TGCTGTACTA CGTCGTGAAC AACGTGCTGT CGATCGCGCA GCAGTACTAC
ATCACGCGCA AGCTCGGCGG CGTCAAGAAG AAGCCGGCCT GA
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| Protein sequence | MDIKRTVLWV IFFMSAVMLY DNWQRDHGRP SMFFPSATHT APAAAGGASG TGATTTAGDV
PAAAAGAAPS TTAPAAQAQL VKFSTDVYDG EIDTRGGTLA KLTLKKQGDG KQPDLYITLF
DHTAGHTYLA RTGLLGGDFP NHNDVYTQLN PGSTSLTGDQ NTLKLSFESP VKGGVKVVKT
YTFTRGSYVI GVDTKIDNVG TAPVTPTVYM ELVRDNTAVE TPMFSHTFLG PAVYTDAKHF
QKIDFSDLDK NKANFEKSAD NGWVAMVQHY FASAWIPQQG AKRDIYAEKI DPALYRVGVK
QPVAAIAPGQ SADVQARLFA GPEEERMLEG IAPGLELVKD YGWVTIIAKP LFWLLEKIHG
YVGNWGWAIV LLTVLIKAVF FPLSAASYKS MARMKEITPR MQALRERFKS DPQKMNAALM
ELYKTEKVNP FGGCLPVVIQ IPVFISLYWV LLASVEMRGA PWILWIHDLS QRDPFFILPV
LMAVSMFVQT SLNPTPPDPV QAKMMKFMPI AFSVMFFFFP AGLVLYYVVN NVLSIAQQYY
ITRKLGGVKK KPA
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