| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3178 |
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| Symbol | |
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| ID | 6124838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 3526075 |
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| End bp | 3527433 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641639771 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001766457 |
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| Protein GI | 170734510 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0366604 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000463802 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAGGCA TCCTGATCCA GCACACGACG CAACGTCAGC TGTGGTTCGG CGCGCTGACG
GCGCTCGTCA TCCTGCTCAC GCTCGGGATC GCCGCGCCGC ACGCGAACGT CGCGCTGCCG
GCCGTCGAGC CGTTCATGCC AATGTGCGCG CTCACCGTAT TCACGACCGC GAGCATCGCC
GCGTTCTTCC TCGGCGCGCA GTTCACCGTC ACGCGCCAGC CCGTGCTCGG GGCGCTCGGC
GGCGCCTATG CGTTCACCGC GCTCGCCGTC GCGCTGCAGC TGCTCACCTT CCCCGGCGTG
TTCGCCCCGC ACGGCCTGCT CGGCGCGCGC CCGCAAAGCG CCGCGTGGAT GTGGGTCTTC
TGGCACGCCG GCTTCCCGTG CTTCGTGATG GCCGCGCTGG TCGCACGCGA GCGGCTGACG
CGCGCCCCGG TCGGCGCGAA AGAGACGCGC CGCTGGACCG TCGCGCTCGT CGGCGGGCCG
GCCATCGCGG CGGCGCTTCT GTGTGCGCTC GCGCTGAACG TGTCGCTGCC ACCGGCATTC
CACCCGCCCC GCGACACAGC CGTGCTGCCC GTCAGTGGCA TCGCGCTCGT CGTGTGGATT
CTCAACGTGC TCGCGCTCGT GGCCGTGCTG GTCACGGGCC GGCTGCGCAC GACGCTCGAC
CTGTGGCTCG CGATCGCGGT GCTCGCCTGC CTCACCGATA CGACGCTGAA CCTGCTGTCC
ACCAACCGCT TCACGGTCGG CTGGTATGTC GCGCGCGTGT TCAGCATGTT CACGCCCGGC
GTGCTCGTGT GCGTGCTCGC GTGGGAAGTG ACGATGCTGT ATCAGCAGCT GTTCGAAGCG
CACGCGACGC TGATCCGCTC TTCCGCGCGC GACGGACTCA CCGGCGCGTT CAATCGCAGC
CACTTCAACG ATCATTTCCA CACGCTGTTC CTGCAGGCGC GGCGGCAGGG CGAACCGCTG
TCGCTGCTGA TGGTCGACGT CGATCACTTC AAGGCGTACA ACGACGCGTT CGGTCACGTG
AAGGGCGATG CATGCCTGAT CGCCGTCGCG AACGCATTGG CGGGCGCGGT GCGGCGGCCG
GCCGATATCG TCGCGCGTTA CGGCGGAGAG GAATTCGCGA TCGTGCTGCC GAACACCGGC
GCGCGCGGTG CGCGGGTGGT GGCTGACGAA GTGCGCGAAG CCGTGCTGCG GCTCGACCTC
GCGATGCCCG ACTCGCCGGC CGGGCGCGTG AGCGTCAGCG TCGGCTGCGC GACCGTGTCG
GCCGACGATC TGTCGACCCC CGACGCGTTG ATCGAAGCCG CCGATGCCGC ACTGTATCGC
GCGAAGGATG CGGGGCGAAA CCGGGTCGTC GTCGCTTGA
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| Protein sequence | MEGILIQHTT QRQLWFGALT ALVILLTLGI AAPHANVALP AVEPFMPMCA LTVFTTASIA
AFFLGAQFTV TRQPVLGALG GAYAFTALAV ALQLLTFPGV FAPHGLLGAR PQSAAWMWVF
WHAGFPCFVM AALVARERLT RAPVGAKETR RWTVALVGGP AIAAALLCAL ALNVSLPPAF
HPPRDTAVLP VSGIALVVWI LNVLALVAVL VTGRLRTTLD LWLAIAVLAC LTDTTLNLLS
TNRFTVGWYV ARVFSMFTPG VLVCVLAWEV TMLYQQLFEA HATLIRSSAR DGLTGAFNRS
HFNDHFHTLF LQARRQGEPL SLLMVDVDHF KAYNDAFGHV KGDACLIAVA NALAGAVRRP
ADIVARYGGE EFAIVLPNTG ARGARVVADE VREAVLRLDL AMPDSPAGRV SVSVGCATVS
ADDLSTPDAL IEAADAALYR AKDAGRNRVV VA
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