Gene Bcenmc03_3171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3171 
Symbol 
ID6124831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp3521165 
End bp3522256 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content72% 
IMG OID641639764 
ProductAraC family transcriptional regulator 
Protein accessionYP_001766450 
Protein GI170734503 
COG category[F] Nucleotide transport and metabolism
[L] Replication, recombination and repair 
COG ID[COG0350] Methylated DNA-protein cysteine methyltransferase
[COG2169] Adenosine deaminase 
TIGRFAM ID[TIGR00589] O-6-methylguanine DNA methyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000719173 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000135353 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAAACCG CCTATCCGAC CGACGATGCC CGCTGGGGCG CCGTGACCAA GCGCGATCCG 
CATGCGGACG GCGCGTTCTT CTATGCCGTC AGCACGACCG GCGTGTTTTG CCGCCCGACC
TGCGCGTCGC GCCAGCCGCG CCGGGAGAAC GTGTCCTTTT TCGCCGATCC GGCGGCCGCG
CGCGCGGCCG GCTTCCGGCC CTGCAAGCGT TGCCAGCCGG AAGGGCTGCC GCGCGAGCTG
GAAATCGTCA ATCGCGCATG CGCGGTGCTC GACGCGCACG CCGAGCGGCT CACGCTGCAG
CAGTTGAGCG ACGCCGTGCA CGTGAGCCCG TTTCACTTGC AGCGGCTCTT CAAGCGTGTG
GTCGGCGTGT CGCCGCGGCA GTACCAGGCC GCGCAGCGCG GCGCCGCGTT GCGGCAGGCG
CTGCAACGCG GGCAGCCGGT CACGCAGGCG GCCGTCGACG CGGGGTTCAA CTCGCCGTCG
CGGCTCTATG CGTCGGTGCC GCGCGAGTTG GGGATGGCGC CTTCCGCATT CCGCCGCCAG
GGCGCCGGCC TGCGGATCGA CTATGCGACC GCGTCGACGT CGCTCGGCAC GGTGCTCGTT
GCCGCCACCG AGCAAGGCAT CTGCCGGATC GCGTTCGGCG GCGACGCGGC GTCGCTCGTC
GGCGAGCTGA ACGACACGTT CGCACGCGCC GAACTGGTTG AAGCGTCGGC CCGGCTCGCG
CCGTTCGTCA CGCAGATCCG CGCGTACCTC GACGGCACGC GGCAGGCGTT CGACCTGCCG
CTCGACATCG CGCCGACCGC GTTCCAGCAG CGCGTGTGGG AAGCGCTGAC GCATATCCCG
TACGGTGAAA CGCGCAGCTA TTCGGAGATC GCGGAGGCGC TGGGTGCGCC GCGCGCGGTG
CGGGCGGTCG CGTCCGCGTG CGCGTCGAAT CCGGTCGCGC TCGCGATTCC GTGCCACCGC
GTCGTGCAGA AGGGCGGCGC GCTCGCCGGC TATCGCTGGG GCGTGCGCCG CAAGGCGACG
CTGCTCGCGG CCGAGGCGCA CCATGTTCAC AACGATGAAG CCGAAGCCGA GACGGAGGGC
AGTGCGGTTT GA
 
Protein sequence
MKTAYPTDDA RWGAVTKRDP HADGAFFYAV STTGVFCRPT CASRQPRREN VSFFADPAAA 
RAAGFRPCKR CQPEGLPREL EIVNRACAVL DAHAERLTLQ QLSDAVHVSP FHLQRLFKRV
VGVSPRQYQA AQRGAALRQA LQRGQPVTQA AVDAGFNSPS RLYASVPREL GMAPSAFRRQ
GAGLRIDYAT ASTSLGTVLV AATEQGICRI AFGGDAASLV GELNDTFARA ELVEASARLA
PFVTQIRAYL DGTRQAFDLP LDIAPTAFQQ RVWEALTHIP YGETRSYSEI AEALGAPRAV
RAVASACASN PVALAIPCHR VVQKGGALAG YRWGVRRKAT LLAAEAHHVH NDEAEAETEG
SAV