Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3171 |
Symbol | |
ID | 6124831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 3521165 |
End bp | 3522256 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641639764 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001766450 |
Protein GI | 170734503 |
COG category | [F] Nucleotide transport and metabolism [L] Replication, recombination and repair |
COG ID | [COG0350] Methylated DNA-protein cysteine methyltransferase [COG2169] Adenosine deaminase |
TIGRFAM ID | [TIGR00589] O-6-methylguanine DNA methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000719173 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000000135353 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAAACCG CCTATCCGAC CGACGATGCC CGCTGGGGCG CCGTGACCAA GCGCGATCCG CATGCGGACG GCGCGTTCTT CTATGCCGTC AGCACGACCG GCGTGTTTTG CCGCCCGACC TGCGCGTCGC GCCAGCCGCG CCGGGAGAAC GTGTCCTTTT TCGCCGATCC GGCGGCCGCG CGCGCGGCCG GCTTCCGGCC CTGCAAGCGT TGCCAGCCGG AAGGGCTGCC GCGCGAGCTG GAAATCGTCA ATCGCGCATG CGCGGTGCTC GACGCGCACG CCGAGCGGCT CACGCTGCAG CAGTTGAGCG ACGCCGTGCA CGTGAGCCCG TTTCACTTGC AGCGGCTCTT CAAGCGTGTG GTCGGCGTGT CGCCGCGGCA GTACCAGGCC GCGCAGCGCG GCGCCGCGTT GCGGCAGGCG CTGCAACGCG GGCAGCCGGT CACGCAGGCG GCCGTCGACG CGGGGTTCAA CTCGCCGTCG CGGCTCTATG CGTCGGTGCC GCGCGAGTTG GGGATGGCGC CTTCCGCATT CCGCCGCCAG GGCGCCGGCC TGCGGATCGA CTATGCGACC GCGTCGACGT CGCTCGGCAC GGTGCTCGTT GCCGCCACCG AGCAAGGCAT CTGCCGGATC GCGTTCGGCG GCGACGCGGC GTCGCTCGTC GGCGAGCTGA ACGACACGTT CGCACGCGCC GAACTGGTTG AAGCGTCGGC CCGGCTCGCG CCGTTCGTCA CGCAGATCCG CGCGTACCTC GACGGCACGC GGCAGGCGTT CGACCTGCCG CTCGACATCG CGCCGACCGC GTTCCAGCAG CGCGTGTGGG AAGCGCTGAC GCATATCCCG TACGGTGAAA CGCGCAGCTA TTCGGAGATC GCGGAGGCGC TGGGTGCGCC GCGCGCGGTG CGGGCGGTCG CGTCCGCGTG CGCGTCGAAT CCGGTCGCGC TCGCGATTCC GTGCCACCGC GTCGTGCAGA AGGGCGGCGC GCTCGCCGGC TATCGCTGGG GCGTGCGCCG CAAGGCGACG CTGCTCGCGG CCGAGGCGCA CCATGTTCAC AACGATGAAG CCGAAGCCGA GACGGAGGGC AGTGCGGTTT GA
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Protein sequence | MKTAYPTDDA RWGAVTKRDP HADGAFFYAV STTGVFCRPT CASRQPRREN VSFFADPAAA RAAGFRPCKR CQPEGLPREL EIVNRACAVL DAHAERLTLQ QLSDAVHVSP FHLQRLFKRV VGVSPRQYQA AQRGAALRQA LQRGQPVTQA AVDAGFNSPS RLYASVPREL GMAPSAFRRQ GAGLRIDYAT ASTSLGTVLV AATEQGICRI AFGGDAASLV GELNDTFARA ELVEASARLA PFVTQIRAYL DGTRQAFDLP LDIAPTAFQQ RVWEALTHIP YGETRSYSEI AEALGAPRAV RAVASACASN PVALAIPCHR VVQKGGALAG YRWGVRRKAT LLAAEAHHVH NDEAEAETEG SAV
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