Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3147 |
Symbol | |
ID | 6124808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 3492329 |
End bp | 3493378 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641639740 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001766427 |
Protein GI | 170734480 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.315246 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCATT TGCAGTCGAT GCGCGTGTTC GTCAAGGTTG CAGATCTCGG CAGTTTCGCG CGGGCCGCGA GCGCAATGGA TATCTCCAAC GCGGTCGCGA CGCGCCACGT CGCCGATCTG GAAGGCCGGC TCGGCACGCG TTTGCTTAAC CGCACCACGC GCAGCCTCTC TCTGACGGAG TCGGGTCAGG TCTATCTGGA GCGTGCCCGC CAGATCCTCG ACGAGCTCGA GGATGTCGAG CAGATGGTCG TCGCACGCAA TCACGAGCCG GTCGGCACGC TGCGCATCGT CGCGCCGGTG GTGTTCGGCC TGCACAACCT CGCCCCCGTG CTGCAGTCGT ACACGGAGAA TTTCCCGAAG GTGGTGCCCG ATCTCACGCT GGTCGACCGG CAGGTCGATC TGGTCGAGGA AGGTTTCGAC GTCGGCATCG TCGTCACGCG CCAGATGCGT AGCGCGAGCA TCGTCACGCG GCGCCTGACC ACCGGTTGCA TGACCGTGTG CGCAACGCCG AGCTATCTGG AGAAGCACGG CGTGCCGACG CATCCGGAAC AGCTCGCCGA GCACCCGGCG CTGAGCCTGC CGACCGAATA CTGGGGCGAC GAGCGCGTGT TCACGGGGCC GGACGGCGAA GTGCGCGTGC GTCCGACCAA CGTGATCGTC GCGAACAACA CCGCGATGCT GCGCCAGTTC GCGTTGCTCG GGATGGGCGT CGCGATCCTG CCGAGCTACC TGATCGGCAG CGACATCGCG CGCGGCGCGC TCGTGCGGCT GCTGCCGGAT TTCCGGCTGC CGCAGGTCGA GATCAACATC GCCTATCCGA GCCGGCGCCA TCTGCCGGCG AAGGTGCGCA CGTTCATCGA CCATCTCGTC GAGCATTTCA GCCACTCGAC CGACGCGATG ATGGGCGAAC AGTGGGCCGC GCAGAGCGCG ACGCTGCCGC CGATCGGCGT CGAGATGCGC GCCGAGCAGC CCGAATCGAC CGATCCGAAC CTGCAGCCGC GTCTGGCGCG CTCGCCGCGC ACGCGCGCAG CGGTGCCATC GCCGCTGTAA
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Protein sequence | MDHLQSMRVF VKVADLGSFA RAASAMDISN AVATRHVADL EGRLGTRLLN RTTRSLSLTE SGQVYLERAR QILDELEDVE QMVVARNHEP VGTLRIVAPV VFGLHNLAPV LQSYTENFPK VVPDLTLVDR QVDLVEEGFD VGIVVTRQMR SASIVTRRLT TGCMTVCATP SYLEKHGVPT HPEQLAEHPA LSLPTEYWGD ERVFTGPDGE VRVRPTNVIV ANNTAMLRQF ALLGMGVAIL PSYLIGSDIA RGALVRLLPD FRLPQVEINI AYPSRRHLPA KVRTFIDHLV EHFSHSTDAM MGEQWAAQSA TLPPIGVEMR AEQPESTDPN LQPRLARSPR TRAAVPSPL
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