Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3143 |
Symbol | def |
ID | 6124804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 3486988 |
End bp | 3487491 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641639736 |
Product | peptide deformylase |
Protein accession | YP_001766423 |
Protein GI | 170734476 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.570267 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTGC TCAATATTCT TCATTACCCC GACAAGCGGC TGCACAAGGT CGCGAAGCCC GTCGACAAGG TCGACGACCG GATCCGCAAG CTCGTCGCCG ACATGGCCGA GACCATGTAC GCGGCGCCCG GCATCGGCCT GGCGGCCACG CAGGTCGACG TGCACGAGCG CGTGATCGTG ATCGACGTCT CCGAGGAAAA GAACGAGCTG CGCGCGTTCA TCAACCCGGA GATCGTGTGG TCGAGCGATG CCAAGCAGAT TTATGAAGAA GGCTGCCTGT CGGTGCCCGG CATCTACGAC GAAGTCGAAC GCCCCGACCA CGTGCGCGTG CGTGCGCTCA ACGAGCAGGG CGAGACGTTC GAGCTCGACT GCGAAGGCCT GCTCGCCGTG TGCGTCCAGC ACGAGATGGA TCACCTGATG GGCCGCGTGT TCGTCGAATA TCTGTCGCCG CTCAAGCAGA CGCGCATCAA GACGAAGATG AAGAAACTCG AACGCGCGAT GTAA
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Protein sequence | MALLNILHYP DKRLHKVAKP VDKVDDRIRK LVADMAETMY AAPGIGLAAT QVDVHERVIV IDVSEEKNEL RAFINPEIVW SSDAKQIYEE GCLSVPGIYD EVERPDHVRV RALNEQGETF ELDCEGLLAV CVQHEMDHLM GRVFVEYLSP LKQTRIKTKM KKLERAM
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