| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3119 |
|---|
| Symbol | |
|---|
| ID | 6124780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 3460491 |
|---|
| End bp | 3461435 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641639711 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001766399 |
|---|
| Protein GI | 170734452 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTCC AGCCCCTTTT TGCCGACTCG GGCGACCGCG TGCAGCGCCG CATGATCGAG
CTGCACACGC GCCTCGCGCC GAACGAGGGC GACACGCTCG CGGCGCTCGA CGGCGTGCGC
TTGCTCCGCG TGAGCCGTCC CGCGCCGCGC ATGCCCGTGC TGTACGAGCC GAGCATCATC
GTCGTGTGCC AGGGTCGCAA GCTCGGCTAT CTCGGCGACC GCTCGTTCGT GTACGACGCG
CAGCAATACC TGGTGCTGTC GGTGCCGCTG CCGTTCGAAT GCGAAACCTT CGCGAGCATG
GACGAGCCGT TTCTCGCGAT CTCGATCCGC GTCGATCTCG CCGTGATCGC CGAGCTCGCG
ATCCTGCTCG ACGAGACGCT CGGCGCGGCG ATCAGCGAGC CGCTCGGCGT CTATTCGACG
CCGCTCGACG CGCCGCTGGC CGATGCGGTC GTGCGGTTGC TCGAAGCGCT CGCGTCGCCG
CACGACACGC GCGTGCTGGG GCCGGCGATC ATGCGCGAGA TCGCGTATCG CGTGCTGACC
GGCGAGCAGG GCGACGCGAT GCGCGCGGCG CTCGTGCAGC AGCATCATTT CGGCCGCATC
GCGAAGGCGC TGCGGCGCAT CCATGCGGAG CTGAGGGCCG ATCTCGACGT CGAGACGCTT
GCCCGCGAAG CGGGGATGAG CCTCGCGGTG TTTCACGCGC AGTTCAAGCA CGTGACGGCG
ACGTCGCCGA TGCAGTACGT GAAGACCGCG CGGCTGCACC AGGCGCGGCT GATGATGGTG
CGCGACGGAC TGGGCGCCGG CGCGGCAGCC GCGCGGGTCG GCTATGCGAG CGCGTCGCAG
TTCAGTCGCG AGTTCAAGCG GCTGTTCGGC CGCAGCCCCG CGGATGACGT GCGCTGGATG
CGTGACAGCG GGGTGCGCCC GGCGATGGCC GACGCGCACG CATAG
|
|---|
| Protein sequence | MSFQPLFADS GDRVQRRMIE LHTRLAPNEG DTLAALDGVR LLRVSRPAPR MPVLYEPSII
VVCQGRKLGY LGDRSFVYDA QQYLVLSVPL PFECETFASM DEPFLAISIR VDLAVIAELA
ILLDETLGAA ISEPLGVYST PLDAPLADAV VRLLEALASP HDTRVLGPAI MREIAYRVLT
GEQGDAMRAA LVQQHHFGRI AKALRRIHAE LRADLDVETL AREAGMSLAV FHAQFKHVTA
TSPMQYVKTA RLHQARLMMV RDGLGAGAAA ARVGYASASQ FSREFKRLFG RSPADDVRWM
RDSGVRPAMA DAHA
|
|---|
| |