Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3113 |
Symbol | |
ID | 6124774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 3454448 |
End bp | 3455239 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641639705 |
Product | pyrimidine 5'-nucleotidase |
Protein accession | YP_001766393 |
Protein GI | 170734446 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01993] pyrimidine 5'-nucleotidase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.735685 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCGCGC GCCGCCCGCC TGCCAGCCCC GACCTGCCGG CCCCGCTGCG GCGCCGGCGC ATCTCGCGCA GCCGGCCGCG CGCCGGCGCG CCCGTCTGGC TGTTCGATCT CGACAACACG CTGCACCACG CGTCGCACGC GATCTTTCCC GAGATCAACC GTGCGATGAC GCAATACATC ATCGACGCGC TGCAGGTCGG GCGCGCCGAA GCCGACCGCC TGCGCAACGG CTACACCGAG CGCTACGGCG CCGCGCTGCT CGGCCTCACG CGCCACCACC CGATCGACCC GCACGATTTC CTGCGCGTGG TCCACACGTT TTCCGACCTG CCCGCGATGG TGCGCGCCGA GCGCGGCCTC GCGCGCATCG TCGCCGCGCT ACCGGGCCGC AAGCTGATCC TGACCAACGC GCCCGAAAAT TATGCGCGCG CGGTGCTGCG CGAGCTGGGC ATCGAGCGGC TGTTCGAGCG CGTGATCGCG ATCGAGCACA TGCGCGACCG CCGCACGTGG CGCGCGAAGC CCGATCACAC GATGCTGCGC CGGACGCTGC GCGCCGCGCA CGCACGGCTC GCCGACGCGA TCCTCGTCGA GGACACGCGC GGCCACCTAA AGCGCTACAA GCGTCTGGGC ATCGGCACGA TATGGATCAC CGGCCACCTG CCCGGCCATC TGCCGACAAC CGGACGCCCG CATTATGTCG ACCAGCGCAT TCGTTCGTTA AAATCGCTGC GACTGGGCAC ACGATCGGGG CGACAAAAAT GCAGCCGACT TACCCGCAGG ACCAAGCCGT AA
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Protein sequence | MSARRPPASP DLPAPLRRRR ISRSRPRAGA PVWLFDLDNT LHHASHAIFP EINRAMTQYI IDALQVGRAE ADRLRNGYTE RYGAALLGLT RHHPIDPHDF LRVVHTFSDL PAMVRAERGL ARIVAALPGR KLILTNAPEN YARAVLRELG IERLFERVIA IEHMRDRRTW RAKPDHTMLR RTLRAAHARL ADAILVEDTR GHLKRYKRLG IGTIWITGHL PGHLPTTGRP HYVDQRIRSL KSLRLGTRSG RQKCSRLTRR TKP
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