Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3109 |
Symbol | hslU |
ID | 6124770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 3449556 |
End bp | 3450899 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641639701 |
Product | ATP-dependent protease ATP-binding subunit HslU |
Protein accession | YP_001766389 |
Protein GI | 170734442 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.104887 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCA TGACCCCTGC CGAGATCGTC TCGGAACTCG ACAAGCACAT CATCGGCCAG GCGAAGGCGA AGAAGGCCGT CGCGGTCGCG CTGCGCAACC GCTGGCGCCG CCAGCAGGTC GCCGAGCCGC TGCGCCAGGA AATCACGCCG AAGAACATCC TGATGATCGG GCCGACGGGC GTCGGCAAGA CCGAAATCGC GCGCCGCCTC GCGAAGCTCG CCGACGCGCC GTTCATCAAG ATCGAAGCGA CCAAGTTCAC CGAAGTCGGC TACGTCGGCC GCGACGTCGA CAGCATCGTG CGCGACCTGA TCGAGATCTC GGTCAAGCAG ACACGCGAAG CCGAAATGCG CAAGGTGCGC AGCAAGGCGA CCGACCAGGC GGAAGACCGC ATCCTCGACA TCCTGCTGCC GCAGCCGCGC GCGGTGGGCT TCGGCGGCAA TGCCGAGCAC GCGAACGACG ACAACAACGC GACGCGCCAG ACGTTCCGCA AGCGCCTGCG CGAAGGCCAG CTCGACGACA AGGAAGTCGA GCTCGACCTC GAGCAGCCGT CGGTCGGCAT GGACATCATG GCGCCGCCGG GGATGGAAGA GATGACCGAG CAGATCCGCT CGATGTTCTC GAATCTCGGC AGCGGCAAGA AGCAGCGCCG CAAGGTGAAG ATCAAGGAAG CGCTGAAGCT GCTGACCGAC GAGGAAGCGG CGAAGATGCT GAACGAAGAG GAAGTGAAGA CGAAGGCCGT GCAGAACGTC GAGCAGAACG GCATCGTGTT CCTCGACGAG ATCGACAAGA TCACGTCGCG CAACAACGAA GGCAGCGGCG GCGAAGTGTC GCGCCAGGGC GTGCAGCGCG ACCTGCTGCC GCTCGTCGAA GGCACGACGG TCAACACGAA GTACGGGATG GTGAAGACCG ATCACATCCT GTTCATCGCG AGCGGCGCGT TCCACCTCGC GAAGCCGAGC GACCTGATTC CGGAGCTGCA AGGCCGCTTC CCGATCCGCG TCGAGCTCGA TTCGCTGTCG GTCGAAGATT TCGAGGCGAT CCTCGATGCG ACCGACGCGA GCCTCGTCAA GCAGTACCAG GCGCTGCTCG CGACCGAAGA CGTGCAGCTC GAATTCGCCG CGGACGGCAT CCGGCGCCTC GCCGAGATCG CGTTCGCAGT CAACGAGAAA ACCGAGAACA TCGGCGCGCG CCGGCTGTAC ACGGTGATCG AGAAGCTGCT CGAGGAAGTG TCGTTCTCGG CCGGCAACCA CGCCGGCGAG CGCGTGACGA TCGACGCGAA GTACGTCGAC CGTGCGCTCG GCGAAGTGGC GCAGGACGAG GACCTGTCGC GCTACGTGCT GTAA
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Protein sequence | MSTMTPAEIV SELDKHIIGQ AKAKKAVAVA LRNRWRRQQV AEPLRQEITP KNILMIGPTG VGKTEIARRL AKLADAPFIK IEATKFTEVG YVGRDVDSIV RDLIEISVKQ TREAEMRKVR SKATDQAEDR ILDILLPQPR AVGFGGNAEH ANDDNNATRQ TFRKRLREGQ LDDKEVELDL EQPSVGMDIM APPGMEEMTE QIRSMFSNLG SGKKQRRKVK IKEALKLLTD EEAAKMLNEE EVKTKAVQNV EQNGIVFLDE IDKITSRNNE GSGGEVSRQG VQRDLLPLVE GTTVNTKYGM VKTDHILFIA SGAFHLAKPS DLIPELQGRF PIRVELDSLS VEDFEAILDA TDASLVKQYQ ALLATEDVQL EFAADGIRRL AEIAFAVNEK TENIGARRLY TVIEKLLEEV SFSAGNHAGE RVTIDAKYVD RALGEVAQDE DLSRYVL
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