| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3083 |
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| Symbol | fliF |
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| ID | 6124744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 3422153 |
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| End bp | 3423916 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641639675 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_001766363 |
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| Protein GI | 170734416 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.869845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTCGC AGGCCAACTC GCTGATCAAC CCAGACGCCC GCGCGGGCCT CAGCCCGGCG
CCCGGCGCCG CCGCGGCCGC CGCGTTGCCG GGCGCGGGCG GCGCAGGCGC GGACTTCGGG
CTGGGCGGCT TCGCCGAACG CATTCCCGGC ATCTCGCGGA TGAAGGGCAA CCCGAAGCTG
CCGTTCGTGA TCGCCGTCGC GTTCGCGATC GCCGCGATCA CCGCGCTCGT GCTGTGGAGC
CGGGCGCCCG ACTACCGCGT GCTGTACAGC AACCTGTCGG ACCGCGACGG CGGCGCGATC
ATCGCCGCGC TCCAGCAGGC AAACGTTCCC TACAAGTTCG CCGATGCCGG CGGCGCGATC
CTGGTGCCGT CGGGCCAGGT GCACGAAACG CGCCTGAAGC TCGCCGCGAT GGGGCTGCCG
AAGGGCGGCT CGGTCGGCTT CGAGCTGATG GACAACCAGA AATTCGGCAT CAGCCAGTTC
GCCGAGCAGA TCAACTACCA GCGCGCGCTC GAAGGCGAAC TGCAGCGCAC CATCGAATCG
ATCAACGCCG TGCGCGGCGC GCGCGTGCAT CTCGCGATCC CGAAGCCGTC GGTGTTCGTG
CGCGACAAGG AAGCGCCGAG CGCGTCGGTA TTCGTCGACC TCTACCCGGG CCGCGTGCTC
GACGAGGGCC AGGTGCAGGC GATCACGCGG ATGGTGTCGT CCGGCGTGCC CGACATGCCG
GCCAAGAACG TGACGATCGT CGACCAGGAC GGCAACCTGC TGACCCAGAC CGCGTCCGCG
TCCGGCCTCG ACGCGAGCCA GCTCAAGTAC GTGCAGCAGG TCGAGCACAA CACCCAGAAG
CGCATCGACG CGATCCTCGC GCCGATCTTC GGCGCCGGCA ACGCCCGTTC GCAGGTCAGC
GCGGATCTCG ATTTCTCGAA GATCGAGCAG ACGTCGGAAA GCTACGGCCC GAACGGCACG
CCGCAGCAGG CCGCGATCCG CAGCCAGCAG ACCAGCAGCG CGACCGAACT CGCGCAGGGC
GGCGCGTCGG GCGTGCCGGG GGCGCTGTCG AACACGCCGC CGCAGCCGGC CTCCGCGCCG
ATCGTCGCCG GCAACGGCCA GAACGGGCCG CAGACCACGC CGGTCAGCGA TCGCAAGGAC
CAGACGACCA ACTACGAGCT CGACAAGACG ATCCGCCATA CCGAACAGCC GATGGGCAGC
GTGAAGCGGC TGTCGGTCGC GGTCGTCGTC AACTACCAGC CGGTCGCCGA CGCGAAGGGC
CACGTGACGA TGCAGCCGCT GCCGCCCGCG AAGCTCGCGC AGGTCGAACA GCTCGTGAAG
GACGCGATGG GCTACGACGC GAAGCGCGGC GACTCGGTGA ACGTCGTGAA CAGCGCGTTC
TCGACCGTGA GCGACCCGTA CGCAGACCTG CCGTGGTGGC GCCAGCCCGA CATGATCGCG
ATGGCGAAGG AAGCCGCGAA GTGGCTCGGC ATCGCGGCGG CCGCGGCGGC GCTCTACTTC
ATGTTCGTGC GCCCGGCGAT GCGCCGCGCG TTCCCGCCGC CCGAGCCGGC CGCGCCGGCG
CTCGCGGCGC CGGAAGACAC GGTCGCGCTC GACGGCCTGC CCGCGCCGGA AAAGGCCGCG
GAAGAAGCCG ATCCGCTGCT GCTCGGCTTC GAGAACGAGA AGAACCGCTA CGAACGCAAC
CTCGACTACG CGCGCACGAT CGCCCGCCAG GATCCGAAGA TCGTCGCCAC CGTCGTGAAG
AACTGGGTGT CCGATGAACG CTGA
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| Protein sequence | MDSQANSLIN PDARAGLSPA PGAAAAAALP GAGGAGADFG LGGFAERIPG ISRMKGNPKL
PFVIAVAFAI AAITALVLWS RAPDYRVLYS NLSDRDGGAI IAALQQANVP YKFADAGGAI
LVPSGQVHET RLKLAAMGLP KGGSVGFELM DNQKFGISQF AEQINYQRAL EGELQRTIES
INAVRGARVH LAIPKPSVFV RDKEAPSASV FVDLYPGRVL DEGQVQAITR MVSSGVPDMP
AKNVTIVDQD GNLLTQTASA SGLDASQLKY VQQVEHNTQK RIDAILAPIF GAGNARSQVS
ADLDFSKIEQ TSESYGPNGT PQQAAIRSQQ TSSATELAQG GASGVPGALS NTPPQPASAP
IVAGNGQNGP QTTPVSDRKD QTTNYELDKT IRHTEQPMGS VKRLSVAVVV NYQPVADAKG
HVTMQPLPPA KLAQVEQLVK DAMGYDAKRG DSVNVVNSAF STVSDPYADL PWWRQPDMIA
MAKEAAKWLG IAAAAAALYF MFVRPAMRRA FPPPEPAAPA LAAPEDTVAL DGLPAPEKAA
EEADPLLLGF ENEKNRYERN LDYARTIARQ DPKIVATVVK NWVSDER
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