| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3053 |
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| Symbol | |
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| ID | 6124714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | - |
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| Start bp | 3391577 |
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| End bp | 3393529 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641639645 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001766333 |
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| Protein GI | 170734386 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0364649 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAACA GCCTTTTCCG AGTATATCGC GCGGTCGCAC TGGCGCTTTC CGCCGCCGCG
CTCGTCGCGG GCACGGCCGC ATGCGCCGCA CCGAACGACG ACACGCTCGC CGGGGATGAC
CAGATCTTCG TGCAGCTTCG CGAAGCCGCA CGCCGCAACG ACGCCGCGAA GGCCGCGCAG
CTCGCGTCGA TGATCCCGAA CTATCCGGTG CCGTCCTACG TCGAGTATTT CCAGATCAAG
CCGCAGCTGT TCGATTCGAC GGGCCGTGCG CGCGTCGATG CGCCGGACGC GCCCGTGCAG
TCGTTCCTGC AGCGCTACGA TGGCCAGGCG ATCGCCGATC GCCTGCGCAA CGACTACCTG
CTCGTGCTCG GCGCGCGCCA CGACTGGCGC AATTTCGACG ACCAGTACAA GCGCTTCGTG
CTCGACGACG ATACGCAGGT CAAGTGCTAT GCGCTCGAAT CGCGCGCGGC GCGCAACGAG
AACGTCGCCG ATGCGGCGCG CGCGCTGCTC GTCGAGCCGA AGAACTACGG CGATGCGTGC
GTCGACCTGA TCACCGCGCT CACCGTCAAC CAGCAGTTCA CGAGCGACGA CGTGTGGCAG
CAGGCGCGCC TCGCGTACGA GCAGAACTAC ACGACGCTCG GCGGCAAGAT CGTCGACGCG
CTCGGCCCGC GCCCCGTTGG CTTCGACCAG GCGACGAGCG CGCCGCCGCT GTATCTCGCG
CGCGGCGTCG GGCCTGACGC CGCGTCGCAT CAGCTCGCGC TGATCGCGCT CGGCCGCATG
GCGCGCAACG ATCCGGACGC CGCCGCCGGG ATGCTGACGA CGGTCGCGCC TTCGCTGACC
AAGCAGGAAC AGGCGATCGC GTGGGGCGCG ATCGGCTACC AGGGCGCGAT CAAGCGCTCG
CCGATGGCGT CGGTCTGGTA CGCGAAATCG GCGAACGCGC CGCTGTCGAA CCCGGGCTAC
GAATGGCGCA CGCGCGCCGC GCTGCTCGCC GGCAACTGGC CGATGGTACG CTGGTCGATC
GAGCAGATGC CGCCGTCGCT GCGCAACGAT CCGGCGTGGA TCTACTGGCA CGCGCGTGCG
CTCAAGCAGA GCGGCGACAC GCTGCAGGCG AACCAGGAAT TCGAGCAGGT CGCGGGCCAG
TTCAACTTCT ACGGGCAGTT GGCCGGCGAA GAGCTCGGCC AGCGCACGAC GATCCCGCCG
CGCACGAAGG TGAGCGACGC CGAGATCGAC GCGATGGACA AGATTCCGGG CTTTGCGCTC
GCGCAGCGCT TCTATGCGCT GAACCTGCGC CTCGAAGGCA ATCGCGAATG GAACTGGCCG
TTGCGCGGGA TGACCGATCG CCAGCTGCTC GCGGCCGCCG AATACGGCAA GCGCGTCGAA
CTGCTCGACC GCACGGTCAA CACGGCCGAC CGCACGAAGG CCGAGCACGA CTTCACGCTG
CGCTATCCGT CGCCGTACCG CACGACCGTC GAGCGCTATG CGCAGTCGAC GGGCCTCGAC
GTCGAATGGG CGTACGGGCT GATCCGCCAG GAATCGCGCT TCATCATCAG CGCGCGTTCG
TCGGTCGGCG CGGGCGGCCT GATGCAGCTG ATGCCGGCGA CGGCCCAGAT GGTCGCGAAG
AAGCTCGGCA TGGGCACGAT CTCGCGTGCG CAGATGCACG ACATCGACAC CAACATCCAG
CTCGGCACCT GGTATCTCGC GGACATCTAC AACAACTTCG ACAGCTCGCC GGTGCTCGCC
ACGGCCGGCT ACAACGCGGG CCCGGGCCGG CCGCGTCAGT GGCGCCAGGT GTTGACGCAG
CCGGTCGAAG GCGCGATCTT CGCGGAGACG ATTCCGTTCA ACGAGACGCG CGACTACGTG
AAGAACGTGC TGTCGAATAC CGTCTACTAC GCGGCGCTCT TCGAGGGCAA ACCGCAGTCG
TTGAAGAAAC GTCTAGGCAT GATCTCGCCC TGA
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| Protein sequence | MSNSLFRVYR AVALALSAAA LVAGTAACAA PNDDTLAGDD QIFVQLREAA RRNDAAKAAQ
LASMIPNYPV PSYVEYFQIK PQLFDSTGRA RVDAPDAPVQ SFLQRYDGQA IADRLRNDYL
LVLGARHDWR NFDDQYKRFV LDDDTQVKCY ALESRAARNE NVADAARALL VEPKNYGDAC
VDLITALTVN QQFTSDDVWQ QARLAYEQNY TTLGGKIVDA LGPRPVGFDQ ATSAPPLYLA
RGVGPDAASH QLALIALGRM ARNDPDAAAG MLTTVAPSLT KQEQAIAWGA IGYQGAIKRS
PMASVWYAKS ANAPLSNPGY EWRTRAALLA GNWPMVRWSI EQMPPSLRND PAWIYWHARA
LKQSGDTLQA NQEFEQVAGQ FNFYGQLAGE ELGQRTTIPP RTKVSDAEID AMDKIPGFAL
AQRFYALNLR LEGNREWNWP LRGMTDRQLL AAAEYGKRVE LLDRTVNTAD RTKAEHDFTL
RYPSPYRTTV ERYAQSTGLD VEWAYGLIRQ ESRFIISARS SVGAGGLMQL MPATAQMVAK
KLGMGTISRA QMHDIDTNIQ LGTWYLADIY NNFDSSPVLA TAGYNAGPGR PRQWRQVLTQ
PVEGAIFAET IPFNETRDYV KNVLSNTVYY AALFEGKPQS LKKRLGMISP
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