Gene Bcenmc03_3020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3020 
Symbol 
ID6124681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp3357856 
End bp3359160 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content72% 
IMG OID641639612 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001766300 
Protein GI170734353 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGT CTTTCACCCG CCGCGCCGAC GCGCTCGCGC GCGACTCGTA CTACGAAGCA 
ACGGCCACGC GGCCCGCGGC CGACGATCCG ATCCTCGAGG AAGCGATCGA CGTCGACGTC
TGCGTGATCG GCGCCGGTTT CGCGGGCCTG TCGACGGCGC TCGACTGCCG CGCGCGCGGG
CTGTCCGTCG CCGTGATCGA TGCGCAGCGG CCCGGCTGGG GCGCGTCGGG CCGCAACGGC
GGCCAGGCGA TCACGGGTTT CGCGAAAGAC GAGGTGATCG AGCAGCAGCT CGGCGCCGAC
GGCGCGCGCG CCGCGTGGTC GCTGTCGCTC GACGGCGTCG CGCTGATCGC CGAGCGCATC
GCGCGCTACG GGATCGACTG CGATTTCACG CGCGGCTACC TGACGGTCGC GACGAAGCCG
CGCCGCATCG ACGACCTGCG CGCGTGGATG AATGCCGCGA CGTCGCGCTG GGGCCATCCG
TCGCTCGCGT GGCTCGATAC CGGCGAGATC CACGCGCGCA TTGCATCGAC GCGCTATCTG
GCCGGCGTGC ACGATCCGCT GTCGGGCCAT CTGCATCCGC TCAAGTACTG CCTCGGCCTT
GCCTATGCCG CACGCCGCGA AGGCGTCGCG CTGTACGCAC ACACGCCGGC GCTCGACGTC
GTGCGCGGCG CCCGGCCCGT CGTGCGCACG CCGTCGGGCG AAGTGCGCTG CCGCTTCGTC
GTGGCGTGCT GCAACGCGGG GCCCGGCGGC GTGCTGCCGG CCGCGACCGC CGCGCGCATC
GCGCCGATCG CGTCGTACAT CATCGCGACC GAGCCGCTCG GCCGCGCGCG CGCCGACGCG
CTGATCGCCC GACGCGAAGC CGTGTGCGAC AACAACTTCT TCCTCGACTA CTTCCGGCTG
TCGGCCGACC ACCGGATGCT GTTCGGCGGC CGTGCGAATT CGGCCGGTGC GTCGCCCGCG
GCGCTCGCCG AAGCGATCCG GCAGCGCATG GTCGGCGTGT TCCCGCAGCT CGGCGACGTG
CGCGTCGATC ACGCATGGGG CGGCTTCGTC GACGTCACGC GCAACCGCGC GCCGGATTTC
GGCGCGATCG ATCCGAACTT CTTCTACGTC CAGGGCTTCA GCGGCCACGG TGTCGCGCTC
ACCGGCATCG CCGGACGCGC GGTCGCCGGC GCGATCGCGG GCGACACGCG CACGTTCGAC
CTGTTCGCCC GCCTGCGTCA CCGGCGCTTT CCCGGCGGCG ATGCATGGCG GCAACCCGCG
CTCGAACTCG GGATGCTGTA CCACCGCGTG CGCGAGCTGT TCTGA
 
Protein sequence
MTQSFTRRAD ALARDSYYEA TATRPAADDP ILEEAIDVDV CVIGAGFAGL STALDCRARG 
LSVAVIDAQR PGWGASGRNG GQAITGFAKD EVIEQQLGAD GARAAWSLSL DGVALIAERI
ARYGIDCDFT RGYLTVATKP RRIDDLRAWM NAATSRWGHP SLAWLDTGEI HARIASTRYL
AGVHDPLSGH LHPLKYCLGL AYAARREGVA LYAHTPALDV VRGARPVVRT PSGEVRCRFV
VACCNAGPGG VLPAATAARI APIASYIIAT EPLGRARADA LIARREAVCD NNFFLDYFRL
SADHRMLFGG RANSAGASPA ALAEAIRQRM VGVFPQLGDV RVDHAWGGFV DVTRNRAPDF
GAIDPNFFYV QGFSGHGVAL TGIAGRAVAG AIAGDTRTFD LFARLRHRRF PGGDAWRQPA
LELGMLYHRV RELF