Gene Bcenmc03_2961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_2961 
Symbol 
ID6124622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp3293822 
End bp3295489 
Gene Length1668 bp 
Protein Length555 aa 
Translation table11 
GC content68% 
IMG OID641639553 
ProductNa+/H+ antiporter 
Protein accessionYP_001766241 
Protein GI170734294 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID[TIGR00831] Na+/H+ antiporter, bacterial form 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.796892 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATCG TTTTCACAGT CCTCATTCTG CTGCTGACCG TCGCACTGTC CGGCGCCATC 
ACGCGCCTCC TGCCGTTGCA ACTGCCGCTG CCGCTGATGC AGATCGCGTT CGGCGCGATG
CTCGCGTGGC CGAAGCTGAA CCTGCACGTC ACGTTCGATC CCGAGATCTT CATGCTGCTG
TTCATTCCGC CGCTGCTGTT CGCGGACGGC TGGCGGATTC CGAAACGCGA GCTTTACCTG
CAGCGCCGCG CGATCCTGAT GCTCGCGTTC GGGCTCGTGT TCATGACGGT ACTCGCAGTG
GGCTACTTCG CACACTGGCT GATTCCCGAG TTGCCGCTGC CGATCGCGTT CGCGCTCGCT
GCGGTGCTGT CGCCGACCGA CGCGGTCGCG CTGTCCGGCA TCGCCGGCAA GGGTCGCATT
CCGCCGCAAC TGATGCACAT CCTCGAAGGC GAGGCGCTGA TGAACGACGC GTCGGGCCTC
GTCGCGCTGA AGTTCGCGAT CGCGGCCGCG CTCACCGGCG TGTTCTCGCT GCGCGCCGCG
TCGGTCACGT TCGTGATCGT CGCCGCCGGT GGGCTCGCGA CGGGCGCGAT CGTGTCGTGG
GTGTTCAGCG CGCTGTCGAC GCGCTTCCTG AATGCCGAGC AGGAAGGCGA TCCGGCCCCG
GGCATCGTGA TGACGCTGCT GGTGCCGTTC GCGGCCTACC TGTTCGCCGA GCACCTCGAC
CTGTCGGGCG TGCTCGCGGC CGTGTCGGCC GGGATGATGA TGAATTACAC GAGCTTCTCG
CGCAAAAGCA CCGTCGCGTC GCGCGTGCGC GCCGAAAGCA CGTGGGCGAT GATCGAGTTC
GTGTTCAACG GCATGGTGTT CATCATGCTC GGGCTGCAGT TGCCGCACAT CATCGGCCGC
GCGCTCGTCG ACGCGCACCA TACGAGCGAC GCGCTGGTCG GCCGCATGAT CTTCAACGTG
TGCGCGATGA TGCTCGCGCT GTACGCGATC CGCTTCCTGT GGGTGTGGCT GCTGCGCTGG
TTCGCGAGCC GCCGCGCCGC GCGCCATGGC CTCGCCGGCA CGATGGCCGG CGTGCGCACG
ATCGCGGTGA TGACGGTCGG CGGCGTGCGC GGCGCGGTCA CGCTCGCCGG CGTGCTGTCG
ATTCCGGTCG CGCTGTCCGA CGGCGCGCCG CTGCCGGGCC GCGACACCGC GATCTTCATC
GCGTCGGCCG TGATCCTCGG CTCGCTGATC GTCGGGGTGA TCGGCCTGCC GCTGCTGCTG
CGCGGCGTGC GCTCGACGCG CAACCCGCTC GGCAACGAGG AGCGCATCGC ACGCTCGGCC
GCCGCGCAGG CCGCGATCCG CGCGATCGAT TCGTCGCACG ACGCGATCTC GGCCGATCTC
GACGAATCGG GCGCGGCGCG TTGCGCGGAC ATCTCCGCGC GCGTGATGGA TCAATATCGC
CGCCGGCTCG CCGCGCTGGC CGACGACGGC CCCACGCCGC GCGCGCAAGC GCAGCAGGCC
GAAACGATGG AGCTGCAGAT GCGGATCGCG GCCGTGCGCG CGGAACGCTC GGCGCTGTAC
CGGCTGCGCA GCGACAGCAA GATTTCCGAC GAGACGCTGA CGAAGCTGCT CCGCGAGATC
GACCTGTCTG AAACCGCGCT GTCGACGCGC AAGAAAGGCA TTGTTTGA
 
Protein sequence
MEIVFTVLIL LLTVALSGAI TRLLPLQLPL PLMQIAFGAM LAWPKLNLHV TFDPEIFMLL 
FIPPLLFADG WRIPKRELYL QRRAILMLAF GLVFMTVLAV GYFAHWLIPE LPLPIAFALA
AVLSPTDAVA LSGIAGKGRI PPQLMHILEG EALMNDASGL VALKFAIAAA LTGVFSLRAA
SVTFVIVAAG GLATGAIVSW VFSALSTRFL NAEQEGDPAP GIVMTLLVPF AAYLFAEHLD
LSGVLAAVSA GMMMNYTSFS RKSTVASRVR AESTWAMIEF VFNGMVFIML GLQLPHIIGR
ALVDAHHTSD ALVGRMIFNV CAMMLALYAI RFLWVWLLRW FASRRAARHG LAGTMAGVRT
IAVMTVGGVR GAVTLAGVLS IPVALSDGAP LPGRDTAIFI ASAVILGSLI VGVIGLPLLL
RGVRSTRNPL GNEERIARSA AAQAAIRAID SSHDAISADL DESGAARCAD ISARVMDQYR
RRLAALADDG PTPRAQAQQA ETMELQMRIA AVRAERSALY RLRSDSKISD ETLTKLLREI
DLSETALSTR KKGIV