| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2950 |
|---|
| Symbol | |
|---|
| ID | 6124611 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 3283185 |
|---|
| End bp | 3284102 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641639542 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001766230 |
|---|
| Protein GI | 170734283 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.954303 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCTGA CGCTCAGACA GCTCAAGTAC TTCGTCGCAA CCGCCGAGCT CGGACAGATC
TCGCAGGCCG CGATCCAGCT CACCATCTCG CAGTCGGCCG TGACGAGCGC GATCAAGGAA
CTGGAGGACA GTCTCGGCAC GCAGTTGTTC GTGCGCACGT CGGCGGGCGT GACGCTGACC
GATACCGGGC GGCGTTTTCT CAATCACGCG TACACGATCC TGTCGTCGGT CGACGAGGCG
ATGCGGATCC CGAATCTCGA AAGCACGCTG ACCGGCACGC TCGCGATCGC CGCGAGCTAC
ACGGTGCTCG GCTACTTCCT GCCGCATCAC GTGCTGCGGC TCAATACGCT CTATCCGCGC
CTGACGATCC ACCTGCACGA GCTGAACCGC GAGTCGATCG AGGAAGGGCT GATCGCGGGC
CGCTACGACA TGGCCGTGCT GCTCACGTCG AACGTGTCGA ATCCGGAGCT CGTGCTGGAG
CCGGTGATCC ATTCGGTGCG CAGGCTGTGG GTTGGCGCGC ATCATCCGCT GCTGCGGCGC
GAGAGCGTCA CGTTCGCGGA GGTCGCGCAC GAGCCGTTCG TGATGCTGAC GGTGGACGAG
GCCGGGCAGA CCGCGCTGCG TTACTGGAAC GAGACGCCGT ACCGGCCGAA CGTGATCCTG
CGCACCTCGT CGGTCGAGGC GGTGCGCAGC ATGGTCGCGA ACGGCAGCGG TGTCGCGATC
CTGTCCGACA TGGTGTATCG CCCGTGGTCG CTCGAAGGGC GGCGCATCGA GACGATCGTG
CTGCGCGACC CGGTGCCGCC GATGAGCGTC GGCCTCGCGT GGCGCAAGAA CATCGAGCTG
AGTCCCGCGA TGCACGCGGT GCGCGACTAT TTCCGGCACA CGTTCATGGA GCCGCGCGCA
CTGGGCGGCG CGACCTGA
|
|---|
| Protein sequence | MALTLRQLKY FVATAELGQI SQAAIQLTIS QSAVTSAIKE LEDSLGTQLF VRTSAGVTLT
DTGRRFLNHA YTILSSVDEA MRIPNLESTL TGTLAIAASY TVLGYFLPHH VLRLNTLYPR
LTIHLHELNR ESIEEGLIAG RYDMAVLLTS NVSNPELVLE PVIHSVRRLW VGAHHPLLRR
ESVTFAEVAH EPFVMLTVDE AGQTALRYWN ETPYRPNVIL RTSSVEAVRS MVANGSGVAI
LSDMVYRPWS LEGRRIETIV LRDPVPPMSV GLAWRKNIEL SPAMHAVRDY FRHTFMEPRA
LGGAT
|
|---|
| |