Gene Bcenmc03_2809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_2809 
Symbol 
ID6124471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand- 
Start bp3128804 
End bp3129787 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content69% 
IMG OID641639401 
Productformamidopyrimidine-DNA glycosylase 
Protein accessionYP_001766090 
Protein GI170734143 
COG category[L] Replication, recombination and repair 
COG ID[COG0266] Formamidopyrimidine-DNA glycosylase 
TIGRFAM ID[TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.509467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.957052 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATGC CCGAAATCGC CCGCCTCGCG TGCCGCCAGG CGGGCGATTT CGGGCATTCC 
CGTGTTTCAT TCGGGGTCGC CGCGAGAACG GCCGTTCTCG TGGCGCCGCA TGCGCGTTCA 
CCCTGTAAAC AGACCGTAGC CTCAGACCCG CAAAACATGC CAGAGTTGCC AGAAGTCGAA 
GTCACGCGCC GGGGCATCGA GCCCTTTGTC GCGGGCCGCC GCGTCGAGCG TGTCGACGTC 
CGTACCGCGA TGCTGCGCTG GCCCGTGCCG GCGGGGCTCG CCGAGCAGTT GCGCGCGCGC 
GAGGTGCTCG CCGTCGAGCG CCGCGGCAAG TACTTGCTGT TCGAGGTCGA TGCGGGCTGG 
TTCATCGTCC ATCTCGGGAT GACGGGCACG TTGCGCGTGT TGCCCGCGGC CGGCGTGCCG 
GTCGCCGCGA AGCACGACCA CATCGACTGG ATCTTCGACG AATTCGTGCT GCGCTTCCGC 
GATCCGCGCC GTTTCGGCGC CGTGCTGTGG CACCCGCGCG AAGCAGGCGA CGTGCATGCG 
CATCCGCTCC TCGCGAGCCT CGGCGTCGAG CCGTTCTCGC CGGCGTTCAC CGGCGCGCTG 
CTGCATGCGC GCACGCGCGG CCGTACGGTG TCGGTCAAGC AGGCGCTGCT CGCGGGCGAC 
ATGGTCGTCG GTGTCGGCAA CATCTATGCG TCGGAGAGCC TGTTTCGCGC CGGCATCCGG 
CCGACGACGG CCGCCGGCAA GGTTTCACTG CCGCGCTACG AGCGGCTGGC CGACGCGGTG 
CGCGCGACGC TCGCCGACGC GATCGAGCGC GGCGGCAGCA CATTGCGCGA TTTCGTCGGC 
AGCAACGGCG AAAGCGGCTA CTTCCAGCTC GACTGCTTCG TCTACGATCG TGCCGGCCAG 
CCGTGCCGCG TTTGCGGCAC GCCGGTTCGC CAGATCGTGC AGGGTCAGCG GTCGACCTAT 
TTCTGCCCGA CGTGCCAGCG TTGA
 
Protein sequence
MRMPEIARLA CRQAGDFGHS RVSFGVAART AVLVAPHARS PCKQTVASDP QNMPELPEVE 
VTRRGIEPFV AGRRVERVDV RTAMLRWPVP AGLAEQLRAR EVLAVERRGK YLLFEVDAGW 
FIVHLGMTGT LRVLPAAGVP VAAKHDHIDW IFDEFVLRFR DPRRFGAVLW HPREAGDVHA 
HPLLASLGVE PFSPAFTGAL LHARTRGRTV SVKQALLAGD MVVGVGNIYA SESLFRAGIR 
PTTAAGKVSL PRYERLADAV RATLADAIER GGSTLRDFVG SNGESGYFQL DCFVYDRAGQ 
PCRVCGTPVR QIVQGQRSTY FCPTCQR