Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_2802 |
Symbol | |
ID | 6124464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 3122084 |
End bp | 3123589 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641639394 |
Product | RNA polymerase factor sigma-54 |
Protein accession | YP_001766083 |
Protein GI | 170734136 |
COG category | [K] Transcription |
COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.402108 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCCA GCCTTCAACT CCGCCTGTCG CAACATCTTG CGCTGACGCC TCAGCTGCAG CAGTCGATCC GGCTCCTGCA GTTGTCGACG CTCGAATTGC AGCAGGAAGT CGCGATGGCC GTCGCGCAGA ACCCGCTGCT CGAGAACGAC GACGAATGGA TCGCCAGCCC GCTGCGCGTC GCGGCGGACG GATCGCTGAT CGCGCAGACG CCGCCCGCAC AGAACACCGA GCCGGCCGCG ATGAACGGCA GCAGCACGTC CAGCGAGCGC GCCGAGCGCG ACGAGCCGGC CGGCGCCGAC GAATACGACG GCTACGGGTC CGGTGACGGC AACGACGGCC CGCAGTGGAA TCTCGACGAA TACGGCCGCT CGAGCGGTGC GTCCGACGAC GACGACCTGC CGCCGCTGCA GGTGCAGGAA GCCGCGACGT CGCTGCGCGA TCATCTCTCG GCGCAGTTGC GCGTCACGCA GGCCGGCCCG CGCGATCGCG CGCTCGTGAT GTTCCTGATC GAATCGCTCG ACGACGACGG CTACCTGACC GCCACGCTCG ACGAAGTGCT CGCCGACCTG CCGCCCGAAC TGGAAATCGA CGGCGACGAA CTGAATGCGG CGCTCGCGCT GCTGCACAGC TTCGACCCGG CCGGCGTCGG CGCGCGCTCG GCCTCCGAAT GCCTGAAGCT GCAGCTGCTG CGTCTCGATC CGTCCCCCAC GCGCACGCTC GCGCTCGAGA TCGTGTCGCA GCATCTCGAA CTGCTCGCCG CACGCGACTT CACACGGTTG CGCAAGCACC TGAAGGCGAG CGACGACGCG CTGCGCGACG CGCACGCGCT GATCCGCTCG CTGGAGCCGT TCCCCGGCGC CGCCTACGGC AAGGCCGAGG CCGACTACGT CGTGCCCGAC ATCATCGTGA AGAAGGCCGG CCAGGGATGG CTCGCGGAGC TCAATCCGGA GGTCGTGCCG CGCCTGCGGA TCAACAACCT GTACGCGAAC ATCCTGCGCA ACAGCCGCGG CGATCCGTCG GCCGGATCGT TGAAGCAGCA GCTGCAGGAA GCGCGCTGGT TGATCAAGAA CATCCAGCAG CGTTTCGACA CGATCCTGCG TGTCGCGCAG GCTATTGTCG AGCGTCAGAA GAATTTCTTT GCGCACGGTG AAATTGCCAT GCGCCCCTTG GTTTTGCGGG AAATAGCTGA TACGCTGGGC CTACACGAGT CGACTGTCAG CCGTGTGACA ACCGGGAAGT ACATGCTGAC CCCGTTCGGG ACGCTTGAAT TTAAGTACTT CTTCGGATCT CACGTCTCGA CCGACACCGG TGGCGCCGCC TCGTCGACCG CCATCCGAGC CCTCATCAAG CAACTGATAG GAGCTGAAGA CCCAAAATCG CCACTTTCGG ACAGCCGCAT TGCCGAGCTG CTGGCAGAAC AGGGTTTCGT GGTCGCGCGC CGCACGGTTG CGAAATATCG CGAAGCCCTC AAGATCCCGG CAGTGAATCT GCGCAAGTCT CTTTAA
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Protein sequence | MKASLQLRLS QHLALTPQLQ QSIRLLQLST LELQQEVAMA VAQNPLLEND DEWIASPLRV AADGSLIAQT PPAQNTEPAA MNGSSTSSER AERDEPAGAD EYDGYGSGDG NDGPQWNLDE YGRSSGASDD DDLPPLQVQE AATSLRDHLS AQLRVTQAGP RDRALVMFLI ESLDDDGYLT ATLDEVLADL PPELEIDGDE LNAALALLHS FDPAGVGARS ASECLKLQLL RLDPSPTRTL ALEIVSQHLE LLAARDFTRL RKHLKASDDA LRDAHALIRS LEPFPGAAYG KAEADYVVPD IIVKKAGQGW LAELNPEVVP RLRINNLYAN ILRNSRGDPS AGSLKQQLQE ARWLIKNIQQ RFDTILRVAQ AIVERQKNFF AHGEIAMRPL VLREIADTLG LHESTVSRVT TGKYMLTPFG TLEFKYFFGS HVSTDTGGAA SSTAIRALIK QLIGAEDPKS PLSDSRIAEL LAEQGFVVAR RTVAKYREAL KIPAVNLRKS L
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