| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2800 |
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| Symbol | |
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| ID | 6124462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 3120473 |
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| End bp | 3121138 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641639392 |
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| Product | lipopolysaccharide transport periplasmic protein LptA |
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| Protein accession | YP_001766081 |
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| Protein GI | 170734134 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.29652 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGAAC CGTTCCCTCG ACAGATTTCC GGCGGCGCTG CGCGCGCCGT CCGCGCCGCG
CTCGCCGCGA CGCTCGTGGC GCTCCCGCTC GTCGGGCTGG CGCCGCTCGC CCATGCCGAG
AAGGCCGACC AGAACAAGCC GATCAACGTC GAGGCCGACA ACCTGACCTA TGACGATCTG
AAGCAGGTGA CGGTCGCGAC CGGCAACGTC GTGATCACGA AGGGCACGAT CATCATCAAG
GGCGACCGCG TCGAAGTGCG CCAGGACCCG GAAGGCTATC AGTACGCGAC GTCGTTCGGC
AGCGGCAAGA AGCACGCGAC GTTCCGCCAG AAGCGCGAAG GCCTCGACGA ATACATCGAC
GGCGACGCCG AGCGCATCGA CTACGACGGC AAGCAGGATC TCACCACGCT GACCACCGCC
GCGACCGTGC GCCGCCTGCA GGGCACGTCG ACGATCGCCG ATACCGTGCA CGGCAGCGTG
ATCACGTACG ACGGCCAGCG CGACTTCTAC ACCGCGAAGG GCGGCAAGGA CGTCGCGGCG
CCGGGCAACC CGAACGGCCG CGTGCGCGCG ATGCTGTCGC CGAAGAACGG CGGCCCCGCG
CCGCTGAACG GGGCGCCGGC CAAGCTGTCG CCGTCGACCA CGATCCAGGG GGCGCCGGGC
CAATGA
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| Protein sequence | MNEPFPRQIS GGAARAVRAA LAATLVALPL VGLAPLAHAE KADQNKPINV EADNLTYDDL
KQVTVATGNV VITKGTIIIK GDRVEVRQDP EGYQYATSFG SGKKHATFRQ KREGLDEYID
GDAERIDYDG KQDLTTLTTA ATVRRLQGTS TIADTVHGSV ITYDGQRDFY TAKGGKDVAA
PGNPNGRVRA MLSPKNGGPA PLNGAPAKLS PSTTIQGAPG Q
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